| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ypwA [H]
Identifier: 229916041
GI number: 229916041
Start: 276306
End: 277778
Strand: Reverse
Name: ypwA [H]
Synonym: EAT1b_0309
Alternate gene names: 229916041
Gene position: 277778-276306 (Counterclockwise)
Preceding gene: 229916042
Following gene: 229916040
Centisome position: 9.26
GC content: 48.95
Gene sequence:
>1473_bases ATGGAAGTTACAAAAGAATGGCGTGAACATTTTAAGCAACTGCGTGCCTTCGACGAGGCGATTTCGCTCTTGTATTGGGA CATGCGTACACAAATGCCGGAACAGTCGGCACCGCTCCGGGCAGAAACAATCGGTTATTTATCGACTGAGGCATTCAAAC GACAGACGAGTGAGTCGTTCGCTTCATTACTAGAACGGATGGCAGATGAAAAGGATTTATCTGACGTCGAGGCGCGGTCA CTTGAAATCGCGAAGACGCAATACGAACGGAATGCCAAGATTCCACACAATGAATATCAAGCATATGTAACACTCGTATC GGAAGCCGAGACGGCATGGGAAAAGGCGAAAGAACAGAACGACTGGGACATGTTCGCTCCATACCTTAAACAGATTATCG AATTCCAGCAAAAATTTGCGGAATATTTCGGCTATGAGAAACATCCGTACGATGCATTGCTCTATGATTTCGAACCGGGC ATGACAGTCGAGCTTTTAGACGAATTGTTCGCCTCGCTCCGAGACGAACTCGTTCCTCTCATCCAGCAGCTCCCAAAAGA ATCGCTCTCTCTGGACTGGTCGATGCCGGCGGATGTCCAAGAAACCATTTGTCATGACTGGATGAATGTCGTCGCATACG ATTTATCACGTGGTCGATTGGATGCGACAGTACATCCGTTCGAAATCACCATCAACCGCCGCGACGTCCGCATTACGACG AAGTATGATGAAGCAGATTTCAGAAATGCACTGTTCGGTACGATGCATGAAGCAGGACACGCGACGTATGAGCAACAAAT CGACCCGATGCTCGATGAACTCGGACTAGGTGGCGGTGCGTCGATGGGGATTCATGAGTCCCAGTCGCTCTTCTTTGAGA ACTTCATCGGACGAAGCGAAGCGTTCTTGCGTCGCGTCTATCCGAAACTACAATCGCTTCATCCGGCATACGCTGCGATC GACTTCGACACTTTCTATCGAGGTGTGAATGAAGCGAAACCATCTCTGATTCGGATCGAGGCTGACGAATTGACATACAG TCTACACATCATCATCCGCTATGAGCTCGAGAAGGCACTCATCCAAGGGACGTTGTCCGTCGATGAGCTTCCTGCGGCAT GGAATGAAAAGTATAAAGAGTATCTCGGACTCGATGTCCCGTCGAATGCCAAAGGAGTCCTCCAAGACGTCCATTGGGCA GGCGGCTCGTTTGGATACTTCCCGAGCTATGCCCTCGGATTGATTTATGCGGCCCAATTGACGGAAACGTTGAAATCAGC TCTTCCGGAATTCGAGACGTTGATTGCAGAAGGTGAAATCGAACCGGTAAAAGCGTGGCTAAAGGAGAACGTTCATCAAT ATGGAAAACGTCTCACCCCGAACGAACTCATTCAACAGGTGACGGGTCAAGCGATTTCGGTTCAACCGCTCGTTCGATAT TTGACGAAGAAATATCAAACAGTTGCCAAATGA
Upstream 100 bases:
>100_bases CCTACAGCAAGCGAGAAGATTTGTAAACTGGTGTAGGCAAAGGTTGACATCTATAATAAAGTAGAAAGGGAACAGAATAA CACATAGGGGTGAAAGACAG
Downstream 100 bases:
>100_bases AACGATTTGCACATCGTGGCGTGATGGCACATCGTCCGGAGAATACGATGTCGGCATTCAGGCTCGCACTCGAAACCGGA GCAGATGGGATTGAAACGGA
Product: carboxypeptidase Taq
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MEVTKEWREHFKQLRAFDEAISLLYWDMRTQMPEQSAPLRAETIGYLSTEAFKRQTSESFASLLERMADEKDLSDVEARS LEIAKTQYERNAKIPHNEYQAYVTLVSEAETAWEKAKEQNDWDMFAPYLKQIIEFQQKFAEYFGYEKHPYDALLYDFEPG MTVELLDELFASLRDELVPLIQQLPKESLSLDWSMPADVQETICHDWMNVVAYDLSRGRLDATVHPFEITINRRDVRITT KYDEADFRNALFGTMHEAGHATYEQQIDPMLDELGLGGGASMGIHESQSLFFENFIGRSEAFLRRVYPKLQSLHPAYAAI DFDTFYRGVNEAKPSLIRIEADELTYSLHIIIRYELEKALIQGTLSVDELPAAWNEKYKEYLGLDVPSNAKGVLQDVHWA GGSFGYFPSYALGLIYAAQLTETLKSALPEFETLIAEGEIEPVKAWLKENVHQYGKRLTPNELIQQVTGQAISVQPLVRY LTKKYQTVAK
Sequences:
>Translated_490_residues MEVTKEWREHFKQLRAFDEAISLLYWDMRTQMPEQSAPLRAETIGYLSTEAFKRQTSESFASLLERMADEKDLSDVEARS LEIAKTQYERNAKIPHNEYQAYVTLVSEAETAWEKAKEQNDWDMFAPYLKQIIEFQQKFAEYFGYEKHPYDALLYDFEPG MTVELLDELFASLRDELVPLIQQLPKESLSLDWSMPADVQETICHDWMNVVAYDLSRGRLDATVHPFEITINRRDVRITT KYDEADFRNALFGTMHEAGHATYEQQIDPMLDELGLGGGASMGIHESQSLFFENFIGRSEAFLRRVYPKLQSLHPAYAAI DFDTFYRGVNEAKPSLIRIEADELTYSLHIIIRYELEKALIQGTLSVDELPAAWNEKYKEYLGLDVPSNAKGVLQDVHWA GGSFGYFPSYALGLIYAAQLTETLKSALPEFETLIAEGEIEPVKAWLKENVHQYGKRLTPNELIQQVTGQAISVQPLVRY LTKKYQTVAK >Mature_490_residues MEVTKEWREHFKQLRAFDEAISLLYWDMRTQMPEQSAPLRAETIGYLSTEAFKRQTSESFASLLERMADEKDLSDVEARS LEIAKTQYERNAKIPHNEYQAYVTLVSEAETAWEKAKEQNDWDMFAPYLKQIIEFQQKFAEYFGYEKHPYDALLYDFEPG MTVELLDELFASLRDELVPLIQQLPKESLSLDWSMPADVQETICHDWMNVVAYDLSRGRLDATVHPFEITINRRDVRITT KYDEADFRNALFGTMHEAGHATYEQQIDPMLDELGLGGGASMGIHESQSLFFENFIGRSEAFLRRVYPKLQSLHPAYAAI DFDTFYRGVNEAKPSLIRIEADELTYSLHIIIRYELEKALIQGTLSVDELPAAWNEKYKEYLGLDVPSNAKGVLQDVHWA GGSFGYFPSYALGLIYAAQLTETLKSALPEFETLIAEGEIEPVKAWLKENVHQYGKRLTPNELIQQVTGQAISVQPLVRY LTKKYQTVAK
Specific function: Unknown
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: NA
Molecular weight: Translated: 56434; Mature: 56434
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVTKEWREHFKQLRAFDEAISLLYWDMRTQMPEQSAPLRAETIGYLSTEAFKRQTSESF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ASLLERMADEKDLSDVEARSLEIAKTQYERNAKIPHNEYQAYVTLVSEAETAWEKAKEQN HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC DWDMFAPYLKQIIEFQQKFAEYFGYEKHPYDALLYDFEPGMTVELLDELFASLRDELVPL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH IQQLPKESLSLDWSMPADVQETICHDWMNVVAYDLSRGRLDATVHPFEITINRRDVRITT HHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCEEEEEECCEEEEEE KYDEADFRNALFGTMHEAGHATYEQQIDPMLDELGLGGGASMGIHESQSLFFENFIGRSE CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHH AFLRRVYPKLQSLHPAYAAIDFDTFYRGVNEAKPSLIRIEADELTYSLHIIIRYELEKAL HHHHHHHHHHHHCCCHHHEEEHHHHHCCHHHCCCCEEEEEHHHEEEEEEEEEEEHHHHHH IQGTLSVDELPAAWNEKYKEYLGLDVPSNAKGVLQDVHWAGGSFGYFPSYALGLIYAAQL HHHCCCHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH TETLKSALPEFETLIAEGEIEPVKAWLKENVHQYGKRLTPNELIQQVTGQAISVQPLVRY HHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHH LTKKYQTVAK HHHHHHHHCC >Mature Secondary Structure MEVTKEWREHFKQLRAFDEAISLLYWDMRTQMPEQSAPLRAETIGYLSTEAFKRQTSESF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ASLLERMADEKDLSDVEARSLEIAKTQYERNAKIPHNEYQAYVTLVSEAETAWEKAKEQN HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC DWDMFAPYLKQIIEFQQKFAEYFGYEKHPYDALLYDFEPGMTVELLDELFASLRDELVPL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH IQQLPKESLSLDWSMPADVQETICHDWMNVVAYDLSRGRLDATVHPFEITINRRDVRITT HHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCEEEEEECCEEEEEE KYDEADFRNALFGTMHEAGHATYEQQIDPMLDELGLGGGASMGIHESQSLFFENFIGRSE CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHH AFLRRVYPKLQSLHPAYAAIDFDTFYRGVNEAKPSLIRIEADELTYSLHIIIRYELEKAL HHHHHHHHHHHHCCCHHHEEEHHHHHCCHHHCCCCEEEEEHHHEEEEEEEEEEEHHHHHH IQGTLSVDELPAAWNEKYKEYLGLDVPSNAKGVLQDVHWAGGSFGYFPSYALGLIYAAQL HHHCCCHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH TETLKSALPEFETLIAEGEIEPVKAWLKENVHQYGKRLTPNELIQQVTGQAISVQPLVRY HHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHH LTKKYQTVAK HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]