| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916019
Identifier: 229916019
GI number: 229916019
Start: 254566
End: 255867
Strand: Reverse
Name: 229916019
Synonym: EAT1b_0287
Alternate gene names: NA
Gene position: 255867-254566 (Counterclockwise)
Preceding gene: 229916020
Following gene: 229916018
Centisome position: 8.53
GC content: 45.31
Gene sequence:
>1302_bases ATGATGAAACGAATGCTATTGATGTTAAGCACAGTCGGGATTTTGTCGGGTTGTGCTGGAGAACAGATGGATGTCGTAAA GTTGGACTATATGCCTGAGCAATGGAACGTGGGCGATTTATATGCGAATCAGATGGATGCGGACTCGGAGACGTGGTCGA CTGCAATTCTCGGCGCTTGTACGGGTGAACCGCTCACTCAGATCGAGGGGGATGTAACGGTTTTCAATTCATATGCGGTG AATCGGAAAGTCATGATATCAGATTATGATCCGAGCTCATATAAATTGGTGACTTTCTTGAAAGGAAAAGAAAACTACAC CATTTGCTATGACGGAGACTATTCCAACATGAAATTAGGGAAGATTGATGAACTACCGGACTTCCTTGATTTATCAGCAG GTATCGAAGTTCCGAACGTCCCGAAAATGAAAGCGGGTACGAAAGAGGAAGAAGAAGTCGCAGAACAGAGTGACCCATCA GAGTACCTGGGGATGCCCATCAACCTGTTCAAAGACACGATGGTTCATTTGACTTCTCCCTTGAATGGAGCGATTGCATT GACAGTTGGTGATCAGGATGGAATCTTTCCCATTTCAACCATTGAACCATATAATGCGCAAATGGGAACCGCAAAGATTG CACTCGGATATAATGACAAATTGGAAGCCGCTCACTTCTACTTCGAAACTACGAATGGAACGACATCCATTCAACCGTTC CTTGTATGGGATGAGAAAGACAGCGCACATGTCCCCATCCAGTTCGAAGGATTAAAAGTCGAACGGGTCCTTCAGACGGA TACATTAGAGCCGGGGGTTAAGACACCGCTTTACATCTTCTCATACATGAAAAATGGGAAACGTGTGAAAGAAGAAGTCA GCTTGACGTACACGAAGGGCGAGTTTGCCACGAATGAGTCCATTAAAGAATCCACTGAAGCAGGACTCATAGCAAATCCT TCCGTTCCACGCGGTCCGTTCTTCTTTCTCCATAAAAAACCGTTAGATGTGGAGGCCACATTGAATTATCCGGATACATT ACGTGCGGCTGGCACCGACATGTCTGATTTGATGAACGCATTTAAGGAGGCAGAACCGGTTGATCGAGCTGGAGAAGTGG GAGACTATCCCTTTCTCACCATCATCGACGGATGGAAAGGGCAAGAGTTTCAGTTAAGCTTCAAGAAACGGTCTAAAAAA GTAGATGTCTATGTGACGGATGAAACACGAAACCAAACGTTCAAACTGAGCAGTGCAGGGGCGGAAACGTTTTTCTCCTA TTTCCCTGATTTAAATGAGTGA
Upstream 100 bases:
>100_bases TCGATGTTTATCTGACGGACCTGCTTCGCGATCAAACATTCAAACTATCAAGCAAAGGAGCGGAACGATTCTTGGATCTA TTTCCGGAGGTGAAAGAGTC
Downstream 100 bases:
>100_bases AAGGCGCCAATCGGCGTCTTTTTATTTGGTAAATACTTCAAAACCAAGATATTGACCTTCTGTATAAAAAGAGAGTAATG ATATGTTATGGGATACGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MMKRMLLMLSTVGILSGCAGEQMDVVKLDYMPEQWNVGDLYANQMDADSETWSTAILGACTGEPLTQIEGDVTVFNSYAV NRKVMISDYDPSSYKLVTFLKGKENYTICYDGDYSNMKLGKIDELPDFLDLSAGIEVPNVPKMKAGTKEEEEVAEQSDPS EYLGMPINLFKDTMVHLTSPLNGAIALTVGDQDGIFPISTIEPYNAQMGTAKIALGYNDKLEAAHFYFETTNGTTSIQPF LVWDEKDSAHVPIQFEGLKVERVLQTDTLEPGVKTPLYIFSYMKNGKRVKEEVSLTYTKGEFATNESIKESTEAGLIANP SVPRGPFFFLHKKPLDVEATLNYPDTLRAAGTDMSDLMNAFKEAEPVDRAGEVGDYPFLTIIDGWKGQEFQLSFKKRSKK VDVYVTDETRNQTFKLSSAGAETFFSYFPDLNE
Sequences:
>Translated_433_residues MMKRMLLMLSTVGILSGCAGEQMDVVKLDYMPEQWNVGDLYANQMDADSETWSTAILGACTGEPLTQIEGDVTVFNSYAV NRKVMISDYDPSSYKLVTFLKGKENYTICYDGDYSNMKLGKIDELPDFLDLSAGIEVPNVPKMKAGTKEEEEVAEQSDPS EYLGMPINLFKDTMVHLTSPLNGAIALTVGDQDGIFPISTIEPYNAQMGTAKIALGYNDKLEAAHFYFETTNGTTSIQPF LVWDEKDSAHVPIQFEGLKVERVLQTDTLEPGVKTPLYIFSYMKNGKRVKEEVSLTYTKGEFATNESIKESTEAGLIANP SVPRGPFFFLHKKPLDVEATLNYPDTLRAAGTDMSDLMNAFKEAEPVDRAGEVGDYPFLTIIDGWKGQEFQLSFKKRSKK VDVYVTDETRNQTFKLSSAGAETFFSYFPDLNE >Mature_433_residues MMKRMLLMLSTVGILSGCAGEQMDVVKLDYMPEQWNVGDLYANQMDADSETWSTAILGACTGEPLTQIEGDVTVFNSYAV NRKVMISDYDPSSYKLVTFLKGKENYTICYDGDYSNMKLGKIDELPDFLDLSAGIEVPNVPKMKAGTKEEEEVAEQSDPS EYLGMPINLFKDTMVHLTSPLNGAIALTVGDQDGIFPISTIEPYNAQMGTAKIALGYNDKLEAAHFYFETTNGTTSIQPF LVWDEKDSAHVPIQFEGLKVERVLQTDTLEPGVKTPLYIFSYMKNGKRVKEEVSLTYTKGEFATNESIKESTEAGLIANP SVPRGPFFFLHKKPLDVEATLNYPDTLRAAGTDMSDLMNAFKEAEPVDRAGEVGDYPFLTIIDGWKGQEFQLSFKKRSKK VDVYVTDETRNQTFKLSSAGAETFFSYFPDLNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48264; Mature: 48264
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRMLLMLSTVGILSGCAGEQMDVVKLDYMPEQWNVGDLYANQMDADSETWSTAILGAC CHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCHHHEEEEEEC TGEPLTQIEGDVTVFNSYAVNRKVMISDYDPSSYKLVTFLKGKENYTICYDGDYSNMKLG CCCCHHHCCCCEEEEEEEECCEEEEEECCCCCCEEEEEEEECCCCEEEEECCCCCCCCCC KIDELPDFLDLSAGIEVPNVPKMKAGTKEEEEVAEQSDPSEYLGMPINLFKDTMVHLTSP CCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHCCCCHHHHHHHHHEECCC LNGAIALTVGDQDGIFPISTIEPYNAQMGTAKIALGYNDKLEAAHFYFETTNGTTSIQPF CCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCEEEEE LVWDEKDSAHVPIQFEGLKVERVLQTDTLEPGVKTPLYIFSYMKNGKRVKEEVSLTYTKG EEECCCCCCCCCEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCHHEEEEEEEEEECC EFATNESIKESTEAGLIANPSVPRGPFFFLHKKPLDVEATLNYPDTLRAAGTDMSDLMNA CCCCCCHHHHHHCCCEEECCCCCCCCEEEEECCCCCEEEEECCCHHHHHCCCCHHHHHHH FKEAEPVDRAGEVGDYPFLTIIDGWKGQEFQLSFKKRSKKVDVYVTDETRNQTFKLSSAG HHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCEEEEECCC AETFFSYFPDLNE HHHHHHHCCCCCC >Mature Secondary Structure MMKRMLLMLSTVGILSGCAGEQMDVVKLDYMPEQWNVGDLYANQMDADSETWSTAILGAC CHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCHHHEEEEEEC TGEPLTQIEGDVTVFNSYAVNRKVMISDYDPSSYKLVTFLKGKENYTICYDGDYSNMKLG CCCCHHHCCCCEEEEEEEECCEEEEEECCCCCCEEEEEEEECCCCEEEEECCCCCCCCCC KIDELPDFLDLSAGIEVPNVPKMKAGTKEEEEVAEQSDPSEYLGMPINLFKDTMVHLTSP CCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHCCCCHHHHHHHHHEECCC LNGAIALTVGDQDGIFPISTIEPYNAQMGTAKIALGYNDKLEAAHFYFETTNGTTSIQPF CCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCEEEEE LVWDEKDSAHVPIQFEGLKVERVLQTDTLEPGVKTPLYIFSYMKNGKRVKEEVSLTYTKG EEECCCCCCCCCEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCHHEEEEEEEEEECC EFATNESIKESTEAGLIANPSVPRGPFFFLHKKPLDVEATLNYPDTLRAAGTDMSDLMNA CCCCCCHHHHHHCCCEEECCCCCCCCEEEEECCCCCEEEEECCCHHHHHCCCCHHHHHHH FKEAEPVDRAGEVGDYPFLTIIDGWKGQEFQLSFKKRSKKVDVYVTDETRNQTFKLSSAG HHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCEEEEECCC AETFFSYFPDLNE HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA