| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916020
Identifier: 229916020
GI number: 229916020
Start: 255864
End: 257120
Strand: Reverse
Name: 229916020
Synonym: EAT1b_0288
Alternate gene names: NA
Gene position: 257120-255864 (Counterclockwise)
Preceding gene: 229916021
Following gene: 229916019
Centisome position: 8.57
GC content: 42.72
Gene sequence:
>1257_bases ATGAAGCGAATCCTTTTACTAATTTGTTGTGTAGGTTTATTGACAGGTTGTGATGATGAACAGATGGATGTCGTAAAGCT AGACTACCTCCCGGAACACTGGAATGTGAAAGATCTTCAATCAGGTCATATGGATGCCAAGTCGGTGATGTGGACTCCTG ATTTACTCGATGCGTGTTCCGGGAATGCAATCTCACGAATCGAAGAGGACGTCACCGTCTATCGCTCGTATGAATTGAAT CGAAAATTCGACGATGCATATAAAATCGTGATGTATATGGAAGGAGATCAACCATACACCGTTTGCTATGACAGCGCTTC TGAACAAATCAGGGCGGAAGAGATAGATGAATTCCCTTACTTCGTTCATACAGAAGAAGGAACCGACATCTTGAGTACGC CAACGATTCGCACGGGTACACATGAAGAATTGAAACAAATGGAACAGAAAGACGAAGGTCATTTCTATCCTATGTCTGTC TCTCTCCTCGAAGGGACAATGATTCATGTGACACCCCCATTATATGGCCAGATCGATTTAACGATTGGAGATCAACGGGG ATTTTTCCCACTTTCTCATTTAGACCCGTTTAATGCCCAATCGGAAGAAGTGGGAATCGCGCTCGGGTATGACGAACAAT CGAAAGAAGCGTATTTTTACTATGAGAAAAATGATGGATTGACGACCATACTTCCTTTAGTCGTGTGGAATGAAAAAGAG CATAAACACGAGCCGATTCAATTCGAAGGGCTACAAGTAGAACAGGTACTTCGGGAAGACATTCTTGAACCGGGTGTCAA GATGCCTCTCTACACGTTCTCCTTCATTGAAGATGGGAAACGTGTGAATGAGGAAATCAGTTTAACTTATTTGAATGATG AATTTTCGACACATGATCCTGTTCAAAACGCTAGCCATTCAAATGGTCCATTCGTTTATGTTCATGAGAAGCCATTAAAC GGTGCGCTCGATATTCAGTACCCAAACGTGCTAATGGCTGAAGAGAACGACATATCAGATCTGATGAATGAAATTGATGA CGCAATACCTGTCAAACGTGCTGGAGATGTGACTGACTATTCGCGTCTTACGATCGTCGATGGTTGGGGTGCTCAAGAAT TTCAGTTAAGTTTCAAGGAACGATCTCAAAAAATCGATGTTTATCTGACGGACCTGCTTCGCGATCAAACATTCAAACTA TCAAGCAAAGGAGCGGAACGATTCTTGGATCTATTTCCGGAGGTGAAAGAGTCATGA
Upstream 100 bases:
>100_bases ATATCTATTTAACGGACCCGCTCCGCGATCAAACGTTTAAATTATCGAGCGCAGGAGCGGAATCGTTCTTAGACATATTT CCGCGCCTAAAGGAAACATT
Downstream 100 bases:
>100_bases TGAAACGAATGCTATTGATGTTAAGCACAGTCGGGATTTTGTCGGGTTGTGCTGGAGAACAGATGGATGTCGTAAAGTTG GACTATATGCCTGAGCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MKRILLLICCVGLLTGCDDEQMDVVKLDYLPEHWNVKDLQSGHMDAKSVMWTPDLLDACSGNAISRIEEDVTVYRSYELN RKFDDAYKIVMYMEGDQPYTVCYDSASEQIRAEEIDEFPYFVHTEEGTDILSTPTIRTGTHEELKQMEQKDEGHFYPMSV SLLEGTMIHVTPPLYGQIDLTIGDQRGFFPLSHLDPFNAQSEEVGIALGYDEQSKEAYFYYEKNDGLTTILPLVVWNEKE HKHEPIQFEGLQVEQVLREDILEPGVKMPLYTFSFIEDGKRVNEEISLTYLNDEFSTHDPVQNASHSNGPFVYVHEKPLN GALDIQYPNVLMAEENDISDLMNEIDDAIPVKRAGDVTDYSRLTIVDGWGAQEFQLSFKERSQKIDVYLTDLLRDQTFKL SSKGAERFLDLFPEVKES
Sequences:
>Translated_418_residues MKRILLLICCVGLLTGCDDEQMDVVKLDYLPEHWNVKDLQSGHMDAKSVMWTPDLLDACSGNAISRIEEDVTVYRSYELN RKFDDAYKIVMYMEGDQPYTVCYDSASEQIRAEEIDEFPYFVHTEEGTDILSTPTIRTGTHEELKQMEQKDEGHFYPMSV SLLEGTMIHVTPPLYGQIDLTIGDQRGFFPLSHLDPFNAQSEEVGIALGYDEQSKEAYFYYEKNDGLTTILPLVVWNEKE HKHEPIQFEGLQVEQVLREDILEPGVKMPLYTFSFIEDGKRVNEEISLTYLNDEFSTHDPVQNASHSNGPFVYVHEKPLN GALDIQYPNVLMAEENDISDLMNEIDDAIPVKRAGDVTDYSRLTIVDGWGAQEFQLSFKERSQKIDVYLTDLLRDQTFKL SSKGAERFLDLFPEVKES >Mature_418_residues MKRILLLICCVGLLTGCDDEQMDVVKLDYLPEHWNVKDLQSGHMDAKSVMWTPDLLDACSGNAISRIEEDVTVYRSYELN RKFDDAYKIVMYMEGDQPYTVCYDSASEQIRAEEIDEFPYFVHTEEGTDILSTPTIRTGTHEELKQMEQKDEGHFYPMSV SLLEGTMIHVTPPLYGQIDLTIGDQRGFFPLSHLDPFNAQSEEVGIALGYDEQSKEAYFYYEKNDGLTTILPLVVWNEKE HKHEPIQFEGLQVEQVLREDILEPGVKMPLYTFSFIEDGKRVNEEISLTYLNDEFSTHDPVQNASHSNGPFVYVHEKPLN GALDIQYPNVLMAEENDISDLMNEIDDAIPVKRAGDVTDYSRLTIVDGWGAQEFQLSFKERSQKIDVYLTDLLRDQTFKL SSKGAERFLDLFPEVKES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47984; Mature: 47984
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILLLICCVGLLTGCDDEQMDVVKLDYLPEHWNVKDLQSGHMDAKSVMWTPDLLDACS CCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCEEECHHHHHHCC GNAISRIEEDVTVYRSYELNRKFDDAYKIVMYMEGDQPYTVCYDSASEQIRAEEIDEFPY CCHHHHHHHHEEEEEEEECCCCCCCEEEEEEEEECCCCEEEEECCCCHHHHHHHHCCCCC FVHTEEGTDILSTPTIRTGTHEELKQMEQKDEGHFYPMSVSLLEGTMIHVTPPLYGQIDL EEECCCCCCEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCEEEEECCCCCEEEEE TIGDQRGFFPLSHLDPFNAQSEEVGIALGYDEQSKEAYFYYEKNDGLTTILPLVVWNEKE EECCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEEEECCCC HKHEPIQFEGLQVEQVLREDILEPGVKMPLYTFSFIEDGKRVNEEISLTYLNDEFSTHDP CCCCCEEECCCCHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCCEEEEEEECCCCCCCCC VQNASHSNGPFVYVHEKPLNGALDIQYPNVLMAEENDISDLMNEIDDAIPVKRAGDVTDY HHCCCCCCCCEEEEEECCCCCEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCC SRLTIVDGWGAQEFQLSFKERSQKIDVYLTDLLRDQTFKLSSKGAERFLDLFPEVKES CEEEEEECCCCHHEEEEHHHCCCEEEEEEEHHHCCCCEEECHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRILLLICCVGLLTGCDDEQMDVVKLDYLPEHWNVKDLQSGHMDAKSVMWTPDLLDACS CCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCEEECHHHHHHCC GNAISRIEEDVTVYRSYELNRKFDDAYKIVMYMEGDQPYTVCYDSASEQIRAEEIDEFPY CCHHHHHHHHEEEEEEEECCCCCCCEEEEEEEEECCCCEEEEECCCCHHHHHHHHCCCCC FVHTEEGTDILSTPTIRTGTHEELKQMEQKDEGHFYPMSVSLLEGTMIHVTPPLYGQIDL EEECCCCCCEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCEEEEECCCCCEEEEE TIGDQRGFFPLSHLDPFNAQSEEVGIALGYDEQSKEAYFYYEKNDGLTTILPLVVWNEKE EECCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEEEECCCC HKHEPIQFEGLQVEQVLREDILEPGVKMPLYTFSFIEDGKRVNEEISLTYLNDEFSTHDP CCCCCEEECCCCHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCCEEEEEEECCCCCCCCC VQNASHSNGPFVYVHEKPLNGALDIQYPNVLMAEENDISDLMNEIDDAIPVKRAGDVTDY HHCCCCCCCCEEEEEECCCCCEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCC SRLTIVDGWGAQEFQLSFKERSQKIDVYLTDLLRDQTFKLSSKGAERFLDLFPEVKES CEEEEEECCCCHHEEEEHHHCCCEEEEEEEHHHCCCCEEECHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA