| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yneT [H]
Identifier: 229916011
GI number: 229916011
Start: 246256
End: 246660
Strand: Reverse
Name: yneT [H]
Synonym: EAT1b_0279
Alternate gene names: 229916011
Gene position: 246660-246256 (Counterclockwise)
Preceding gene: 229916014
Following gene: 229916010
Centisome position: 8.22
GC content: 55.31
Gene sequence:
>405_bases ATGGATGATCAGCGTTTGAAGCAACTTTTGTCTGAAGCGAAGACCATTGCGGTCGTCGGCGTGTCCGACAACCCGAACAA GACGGCCAACCAGATCGCAGAGTATTTACTCCGTGTCGGCTATACCGTCATCCCCGTCAACCCGATGCTCGAGGAGTGGA ACGGACGCAAAGCGTATCCGTCCGTCGAGAGCATCCCGGGTAGAATCGATATCGTCGACGTGTTCCGTCGCAGCGAATTT TTAGCAGGTGTCGCGGAAGATGCGGTACGACATGGGGATGTCGGGCTCGTCTTCAATCAGCTCGGTCTCTCAAGTCCTGA GGCGGAGAAAATCGTACGCGATGCCGGACTCGACTACGTCGAGAATCGCTGCCTGTACGTGGAACATGCTCGTCTACTCG GATAA
Upstream 100 bases:
>100_bases ATTGTAATGTTGGGTCATTATACCTTATGATGAAAATAGGACTTGAAACAGGAAGGAAGGTAACGTTACACTGTAAACGT AAACCAAAGGGGGATTTTGG
Downstream 100 bases:
>100_bases GACCTACCTCCTTGGTAGGTCTCCTTTTTTTCAGCGATGGCTGACAAGGGAGGCTTGCCAGAATCGATGAACAGCTATAC AATAAGAAAGAAAAACGAAC
Product: CoA-binding domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MDDQRLKQLLSEAKTIAVVGVSDNPNKTANQIAEYLLRVGYTVIPVNPMLEEWNGRKAYPSVESIPGRIDIVDVFRRSEF LAGVAEDAVRHGDVGLVFNQLGLSSPEAEKIVRDAGLDYVENRCLYVEHARLLG
Sequences:
>Translated_134_residues MDDQRLKQLLSEAKTIAVVGVSDNPNKTANQIAEYLLRVGYTVIPVNPMLEEWNGRKAYPSVESIPGRIDIVDVFRRSEF LAGVAEDAVRHGDVGLVFNQLGLSSPEAEKIVRDAGLDYVENRCLYVEHARLLG >Mature_134_residues MDDQRLKQLLSEAKTIAVVGVSDNPNKTANQIAEYLLRVGYTVIPVNPMLEEWNGRKAYPSVESIPGRIDIVDVFRRSEF LAGVAEDAVRHGDVGLVFNQLGLSSPEAEKIVRDAGLDYVENRCLYVEHARLLG
Specific function: Unknown
COG id: COG1832
COG function: function code R; Predicted CoA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081810, Length=134, Percent_Identity=39.5522388059701, Blast_Score=97, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003781 - InterPro: IPR016040 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14882; Mature: 14882
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDQRLKQLLSEAKTIAVVGVSDNPNKTANQIAEYLLRVGYTVIPVNPMLEEWNGRKAYP CCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCC SVESIPGRIDIVDVFRRSEFLAGVAEDAVRHGDVGLVFNQLGLSSPEAEKIVRDAGLDYV CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCHHH ENRCLYVEHARLLG HCCCCEEHHHHHCC >Mature Secondary Structure MDDQRLKQLLSEAKTIAVVGVSDNPNKTANQIAEYLLRVGYTVIPVNPMLEEWNGRKAYP CCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCC SVESIPGRIDIVDVFRRSEFLAGVAEDAVRHGDVGLVFNQLGLSSPEAEKIVRDAGLDYV CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCHHH ENRCLYVEHARLLG HCCCCEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969507; 9384377 [H]