| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229915968
Identifier: 229915968
GI number: 229915968
Start: 206687
End: 207322
Strand: Reverse
Name: 229915968
Synonym: EAT1b_0236
Alternate gene names: NA
Gene position: 207322-206687 (Counterclockwise)
Preceding gene: 229915969
Following gene: 229915966
Centisome position: 6.91
GC content: 37.42
Gene sequence:
>636_bases ATGATGGATATATACCGTTTACTAAGAATTCAATTATTTGAATGGAGATATCAGCGGTTACTCGGGATTATTCCGCTATT TGTATTCTGCGCTTCTCTTCTTGTTATAGTTAGGGACAGTTCTGAACTGCACCTCAGTATACAGATTGTCCATTCTCTCT ATCTGCCTTGGATTTCATGGTCTGTCATTCTTTATTTTCAGCCGTTATATGACACAGGGGCTTATTACACATTGATCCCA CACTACCGAAAATGGATTGGGTTCAATTTCGTGTTCCTGTTCACATTTTATGTTGTAGGGTATCTTTTATTGCTATTTAA TATCGATGGCGCGTTCCGGTTGATTCAAACAAATCCATTAATACTAGTTCACCATCTACTTTTACTAACTCTCTTTTGGT GGATTGGAGCAGCTCTGGTACTTCTTTTAAAGAGCTTCGAGTATGCGACTGCCCTCGTACTAACCTATACACTCATCGAG GTGATTACTCGAGGTGAGTTTATGCCTTGGCCGCATATCTTTTACTTCTATGAGTATTATGATTTTACAATTTATATGCA AAAAATCAGTTTGATTGTGTTCATTTCGTTAGTTTTTGTTTGTCTGGCACTTGTACGTTTGTACAAAAGAGATTGA
Upstream 100 bases:
>100_bases CATCAGACGGAGCCTGTATCCGATATTTTGATGAAGAGAAAGGCGATGCGAACATCGTTCCTCGACTTTCAGATGGTTAC TTAGCTGTGATGAGGGCGCA
Downstream 100 bases:
>100_bases AGAGGTTCATTCGTCTTTTATATAGGTCATTCTATAAATATTTTATACACACAAAAACCTAAAGGAGCACACGGTTTCGA GTACTCCTTTAGGTTTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MMDIYRLLRIQLFEWRYQRLLGIIPLFVFCASLLVIVRDSSELHLSIQIVHSLYLPWISWSVILYFQPLYDTGAYYTLIP HYRKWIGFNFVFLFTFYVVGYLLLLFNIDGAFRLIQTNPLILVHHLLLLTLFWWIGAALVLLLKSFEYATALVLTYTLIE VITRGEFMPWPHIFYFYEYYDFTIYMQKISLIVFISLVFVCLALVRLYKRD
Sequences:
>Translated_211_residues MMDIYRLLRIQLFEWRYQRLLGIIPLFVFCASLLVIVRDSSELHLSIQIVHSLYLPWISWSVILYFQPLYDTGAYYTLIP HYRKWIGFNFVFLFTFYVVGYLLLLFNIDGAFRLIQTNPLILVHHLLLLTLFWWIGAALVLLLKSFEYATALVLTYTLIE VITRGEFMPWPHIFYFYEYYDFTIYMQKISLIVFISLVFVCLALVRLYKRD >Mature_211_residues MMDIYRLLRIQLFEWRYQRLLGIIPLFVFCASLLVIVRDSSELHLSIQIVHSLYLPWISWSVILYFQPLYDTGAYYTLIP HYRKWIGFNFVFLFTFYVVGYLLLLFNIDGAFRLIQTNPLILVHHLLLLTLFWWIGAALVLLLKSFEYATALVLTYTLIE VITRGEFMPWPHIFYFYEYYDFTIYMQKISLIVFISLVFVCLALVRLYKRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25392; Mature: 25392
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDIYRLLRIQLFEWRYQRLLGIIPLFVFCASLLVIVRDSSELHLSIQIVHSLYLPWISW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHH SVILYFQPLYDTGAYYTLIPHYRKWIGFNFVFLFTFYVVGYLLLLFNIDGAFRLIQTNPL HHHHEEEEHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCH ILVHHLLLLTLFWWIGAALVLLLKSFEYATALVLTYTLIEVITRGEFMPWPHIFYFYEYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH DFTIYMQKISLIVFISLVFVCLALVRLYKRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMDIYRLLRIQLFEWRYQRLLGIIPLFVFCASLLVIVRDSSELHLSIQIVHSLYLPWISW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHH SVILYFQPLYDTGAYYTLIPHYRKWIGFNFVFLFTFYVVGYLLLLFNIDGAFRLIQTNPL HHHHEEEEHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCH ILVHHLLLLTLFWWIGAALVLLLKSFEYATALVLTYTLIEVITRGEFMPWPHIFYFYEYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH DFTIYMQKISLIVFISLVFVCLALVRLYKRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA