| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yheG [H]
Identifier: 229915966
GI number: 229915966
Start: 204685
End: 205305
Strand: Reverse
Name: yheG [H]
Synonym: EAT1b_0234
Alternate gene names: 229915966
Gene position: 205305-204685 (Counterclockwise)
Preceding gene: 229915968
Following gene: 229915965
Centisome position: 6.84
GC content: 47.34
Gene sequence:
>621_bases TTGTCAACAATTGCTTTATTCGGCGGAAGTGGCCGTACAGGGGAACGGATACTTGAGCGTTTATTGAATCAAGGACATGA CGTCAAACTTTTAACAAGACATTCGATGGATTCTAAGGAGGGTGTCAACCAAATCATCGGAGACGCGACGGACCAAGCAG CAGTACGAGAAACGGTTCGATTTGCAGACGTCGTCATCTCGGCGTTAGGGACGGACAAACAAAACGTATTGTCTACATTC ACACCACTCGTGATCGCAGCGATGAAACAATTTAACGTAACACGCATCATCACGGTCGGGACCGCCGGCATCTTACAGGC GTATGATAGCGACAATTATCGCTTTGAAACGAAAGAATCGAAGCGTACGATGACAACCGCAGCCGAAGATCATGCCCGCG CTTATGAGTTATTACGGGATTCAGGTTTAGCCTTCACAATCATCTGTCCGACTCAACTGATCGATGAGCAATCGGACGGA GACATCATCATCTCAAAAGAGGTATTAGGCACGAAACATTCAGGTCCGATCTCAAGGAACGATGTCGCCGATTTAGCGAT GGATTGTTTAACGAATGATGCATATGTCGGACACCGTGTCGGCATCACGACGGAATCATAA
Upstream 100 bases:
>100_bases TCTTTTCAAGTGGAAATGAACCATTTCAGGCAGTTTTGTGAACGCTTCCGTGTTATGATGGCGTTGGATATTTCTTTCAT CTTGATGGGGAGGGGTTTAC
Downstream 100 bases:
>100_bases TTAGGGGATGGGAAACATGCACGAACAACGAGAACAATTGGCACGACTCGCTTTAACGTTTGAACAAGAGGAGATGACGG ACGCTGCACGACTCGCTCGG
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSTIALFGGSGRTGERILERLLNQGHDVKLLTRHSMDSKEGVNQIIGDATDQAAVRETVRFADVVISALGTDKQNVLSTF TPLVIAAMKQFNVTRIITVGTAGILQAYDSDNYRFETKESKRTMTTAAEDHARAYELLRDSGLAFTIICPTQLIDEQSDG DIIISKEVLGTKHSGPISRNDVADLAMDCLTNDAYVGHRVGITTES
Sequences:
>Translated_206_residues MSTIALFGGSGRTGERILERLLNQGHDVKLLTRHSMDSKEGVNQIIGDATDQAAVRETVRFADVVISALGTDKQNVLSTF TPLVIAAMKQFNVTRIITVGTAGILQAYDSDNYRFETKESKRTMTTAAEDHARAYELLRDSGLAFTIICPTQLIDEQSDG DIIISKEVLGTKHSGPISRNDVADLAMDCLTNDAYVGHRVGITTES >Mature_205_residues STIALFGGSGRTGERILERLLNQGHDVKLLTRHSMDSKEGVNQIIGDATDQAAVRETVRFADVVISALGTDKQNVLSTFT PLVIAAMKQFNVTRIITVGTAGILQAYDSDNYRFETKESKRTMTTAAEDHARAYELLRDSGLAFTIICPTQLIDEQSDGD IIISKEVLGTKHSGPISRNDVADLAMDCLTNDAYVGHRVGITTES
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4502419, Length=205, Percent_Identity=30.7317073170732, Blast_Score=82, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000534 [H]
Pfam domain/function: PF01118 Semialdhyde_dh [H]
EC number: NA
Molecular weight: Translated: 22420; Mature: 22288
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIALFGGSGRTGERILERLLNQGHDVKLLTRHSMDSKEGVNQIIGDATDQAAVRETVR CCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHH FADVVISALGTDKQNVLSTFTPLVIAAMKQFNVTRIITVGTAGILQAYDSDNYRFETKES HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCCEEECCHH KRTMTTAAEDHARAYELLRDSGLAFTIICPTQLIDEQSDGDIIISKEVLGTKHSGPISRN HHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCEEEEHHHHCCCCCCCCCCH DVADLAMDCLTNDAYVGHRVGITTES HHHHHHHHHHCCCCCCCEEECEEECC >Mature Secondary Structure STIALFGGSGRTGERILERLLNQGHDVKLLTRHSMDSKEGVNQIIGDATDQAAVRETVR CEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHH FADVVISALGTDKQNVLSTFTPLVIAAMKQFNVTRIITVGTAGILQAYDSDNYRFETKES HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCCEEECCHH KRTMTTAAEDHARAYELLRDSGLAFTIICPTQLIDEQSDGDIIISKEVLGTKHSGPISRN HHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCEEEEHHHHCCCCCCCCCCH DVADLAMDCLTNDAYVGHRVGITTES HHHHHHHHHHCCCCCCCEEECEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]