| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is yafQ [C]
Identifier: 229587241
GI number: 229587241
Start: 1257602
End: 1257745
Strand: Direct
Name: yafQ [C]
Synonym: RAF_ORF1231
Alternate gene names: 229587241
Gene position: 1257602-1257745 (Clockwise)
Preceding gene: 229587240
Following gene: 229587242
Centisome position: 98.36
GC content: 31.94
Gene sequence:
>144_bases ATGAGAGATCATGCCCTTATAGGTAATTGGAAAGATTGTAGAGATTGTCATATTAAACCGGATTTAGTATTAATTTATAG AAAACCCGATGCTGACACATTGGAGTTAATAAAATTAGGTTCACACAGTACACTTGGTTTTTAA
Upstream 100 bases:
>100_bases GATTAAACGTACTGCACAGTTTAAACGTGGAATAAATTTGGATGATATTTTACTGAAAGCAGTTAGATACTTAGTTGCTG ATATAACATGACCTATACAT
Downstream 100 bases:
>100_bases TTATTTTGAAATGAACCGGGAACGAGTTCCCCCAAAAACCACCTAACCATCCATAGTACTGGACAGTTTTTAAAAAGCGT TTGATGTCGCTCCTAGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Addiction Module Antitoxin; StbE/RelE-Family Protein; Addiction Module xin Rele/Stbe Family; Plasmid Stabilization System Protein/Addiction Module xin; Addiction Module xin RelE/StbE Family Protein
Number of amino acids: Translated: 47; Mature: 47
Protein sequence:
>47_residues MRDHALIGNWKDCRDCHIKPDLVLIYRKPDADTLELIKLGSHSTLGF
Sequences:
>Translated_47_residues MRDHALIGNWKDCRDCHIKPDLVLIYRKPDADTLELIKLGSHSTLGF >Mature_47_residues MRDHALIGNWKDCRDCHIKPDLVLIYRKPDADTLELIKLGSHSTLGF
Specific function: Unknown
COG id: COG3041
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5406; Mature: 5406
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDHALIGNWKDCRDCHIKPDLVLIYRKPDADTLELIKLGSHSTLGF CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MRDHALIGNWKDCRDCHIKPDLVLIYRKPDADTLELIKLGSHSTLGF CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA