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The map label for this gene is 229587242

Identifier: 229587242

GI number: 229587242

Start: 1257854

End: 1258963

Strand: Direct

Name: 229587242

Synonym: RAF_ORF1232

Alternate gene names: NA

Gene position: 1257854-1258963 (Clockwise)

Preceding gene: 229587241

Following gene: 229587248

Centisome position: 98.38

GC content: 27.21

Gene sequence:

>1110_bases
ATGACATCAAAAAACCAAACAAACATTATGCTACTATACCGAAAATACTTTATAAAAAATATCTTACCGCTGCTTATAGT
CGTTACTTTTTCAGTGACTAGTATAGTATGGATAACGCAAATATTAAAACTTTTATATTTATTTGATAAAGGTATAAAAG
TTATGGACTTCTTCAGTTTAATAGTTTTAGTACTTCCTACTTTATTATTTATTCTGTTACCGGTAATAATGGTTATTACC
GTGATCTATATCTATAATAATTTAAAAGTCGAGCGACAATTAATTATATTACAAACTTCAGGAGTTAATAATGTACAGCT
AGCACTGCCTGCTTTATATGTCGCATTAATAGTTATGCTACTTGCTTATTATATATCTTCTAACATCCTGCCGTTATCTC
ATATAAACTTAAAATCACGTTTAAACTTTATAAAGAATAATTATATCTCAAGTATGATTGAAGAGAAAACTTTTAATAAA
GTAACGAAAGATATCACTGTTTTTATAGATAAAAAATCAGCAGGAAATATTATGAACGGCGTAATAATATTTGATAATCG
CAACGCTGATAACCCATCAGTAGTATTTGCGGGTTCAGGTACTCTTAATATATATGATAATAGCCCGATTTTTGAACTTA
ATAAAGGCATAAGACAAGAATATGACGTAAACGGTAATTTAACTCAGTTAACTTTCGATTCTTTAATAATAAAACTGCAA
AATGATAATCCTTTAGTATCGCAAAGAACTAAACATAATAAAGAAGCAAACGAATATTATATAAGCGAATTACTTGCCCC
TCCTCATGATTTAGCTATTACTAAAAAAATTAAATTAATTGCTGAAGCACATCAAAGAATAATTTGGCCTTTATACAATT
TTGTATTACCTTTTGTAGCACTTGCAGTTTTTTTGAGATATCCTTATAGCAAAAAAACAACTTTTATGCCGGTATTATTT
TCTGCCTTAACAGTATTGCTAGTTACTTCAATTCATTTTATATTACAAAATTTTGCTTCAAAAAATCTAGATTTTATTTT
TGCTTGTTATTTCAATTTGGTTATTGCTTTAACGATCGGATTATATTTATTTGTACGTAAAAGAATATAA

Upstream 100 bases:

>100_bases
AAATGAACCGGGAACGAGTTCCCCCAAAAACCACCTAACCATCCATAGTACTGGACAGTTTTTAAAAAGCGTTTGATGTC
GCTCCTAGCTAAAAACGAGA

Downstream 100 bases:

>100_bases
ATTTATTAGACTACTTTATTCCAAGCTCCACGAGGATTTTGAGTAAAACAATCTATTTTGTTTTCCTGTCCGGTAAATTT
ATTTATTTTAACTGTTAATT

Product: Putative permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MTSKNQTNIMLLYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLFDKGIKVMDFFSLIVLVLPTLLFILLPVIMVIT
VIYIYNNLKVERQLIILQTSGVNNVQLALPALYVALIVMLLAYYISSNILPLSHINLKSRLNFIKNNYISSMIEEKTFNK
VTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNSPIFELNKGIRQEYDVNGNLTQLTFDSLIIKLQ
NDNPLVSQRTKHNKEANEYYISELLAPPHDLAITKKIKLIAEAHQRIIWPLYNFVLPFVALAVFLRYPYSKKTTFMPVLF
SALTVLLVTSIHFILQNFASKNLDFIFACYFNLVIALTIGLYLFVRKRI

Sequences:

>Translated_369_residues
MTSKNQTNIMLLYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLFDKGIKVMDFFSLIVLVLPTLLFILLPVIMVIT
VIYIYNNLKVERQLIILQTSGVNNVQLALPALYVALIVMLLAYYISSNILPLSHINLKSRLNFIKNNYISSMIEEKTFNK
VTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNSPIFELNKGIRQEYDVNGNLTQLTFDSLIIKLQ
NDNPLVSQRTKHNKEANEYYISELLAPPHDLAITKKIKLIAEAHQRIIWPLYNFVLPFVALAVFLRYPYSKKTTFMPVLF
SALTVLLVTSIHFILQNFASKNLDFIFACYFNLVIALTIGLYLFVRKRI
>Mature_368_residues
TSKNQTNIMLLYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLFDKGIKVMDFFSLIVLVLPTLLFILLPVIMVITV
IYIYNNLKVERQLIILQTSGVNNVQLALPALYVALIVMLLAYYISSNILPLSHINLKSRLNFIKNNYISSMIEEKTFNKV
TKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNSPIFELNKGIRQEYDVNGNLTQLTFDSLIIKLQN
DNPLVSQRTKHNKEANEYYISELLAPPHDLAITKKIKLIAEAHQRIIWPLYNFVLPFVALAVFLRYPYSKKTTFMPVLFS
ALTVLLVTSIHFILQNFASKNLDFIFACYFNLVIALTIGLYLFVRKRI

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 42323; Mature: 42192

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKNQTNIMLLYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLFDKGIKVMDFFSL
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IVLVLPTLLFILLPVIMVITVIYIYNNLKVERQLIILQTSGVNNVQLALPALYVALIVML
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHH
LAYYISSNILPLSHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNG
HHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCC
VIIFDNRNADNPSVVFAGSGTLNIYDNSPIFELNKGIRQEYDVNGNLTQLTFDSLIIKLQ
EEEEECCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEHEEEEEC
NDNPLVSQRTKHNKEANEYYISELLAPPHDLAITKKIKLIAEAHQRIIWPLYNFVLPFVA
CCCCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVFLRYPYSKKTTFMPVLFSALTVLLVTSIHFILQNFASKNLDFIFACYFNLVIALTIG
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LYLFVRKRI
HHHHHHHCC
>Mature Secondary Structure 
TSKNQTNIMLLYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLFDKGIKVMDFFSL
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IVLVLPTLLFILLPVIMVITVIYIYNNLKVERQLIILQTSGVNNVQLALPALYVALIVML
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHH
LAYYISSNILPLSHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNG
HHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCC
VIIFDNRNADNPSVVFAGSGTLNIYDNSPIFELNKGIRQEYDVNGNLTQLTFDSLIIKLQ
EEEEECCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEHEEEEEC
NDNPLVSQRTKHNKEANEYYISELLAPPHDLAITKKIKLIAEAHQRIIWPLYNFVLPFVA
CCCCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVFLRYPYSKKTTFMPVLFSALTVLLVTSIHFILQNFASKNLDFIFACYFNLVIALTIG
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LYLFVRKRI
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]