Definition Rickettsia africae ESF-5 chromosome, complete genome.
Accession NC_012633
Length 1,278,540

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The map label for this gene is 229587239

Identifier: 229587239

GI number: 229587239

Start: 1256503

End: 1257150

Strand: Direct

Name: 229587239

Synonym: RAF_ORF1229

Alternate gene names: NA

Gene position: 1256503-1257150 (Clockwise)

Preceding gene: 229587234

Following gene: 229587240

Centisome position: 98.28

GC content: 28.24

Gene sequence:

>648_bases
ATGTTTGAAGTTTTTTATAATTTTTGCGGCTTAAATCAAGAAATATTCTTATTTTTGAATAAAATTACTAATATCGGCTT
TATACCTTATTTTTTTAAAATAATTTCGTTTTGTTTTAATATCGCTAATTTCGCTTTAATATATATTTTATACTGTATAT
ATTTTTATATTCAATTAAAGAAAACCAAAAATGATAAGAAGCGGCAAAATAAATTCTGGCACAATTATAATAAGTTAGTT
GAAATCGGTATAATATACGGGGTATTCGGTTTAATTTTTACCGCTCTTAAATTTTCAGTTAATTTCCCTCGCCCTTATTG
CAGTCTTCCTGTAGATAGTTTCATGACCATAATAAATACTGCAAACGAAAGATGCTTTTCAAGCTTTCCAAGCAGCCACG
CAGCTCTTAGCGTGTTAGTAACGTATTTTGCTTGGAATTATATAAAATTACCATTAAAAATCTTAATGATTTGTGTTATT
ATGCTCGTGTCTTTATCTCGCATAAGCCTTGCTATGCATTACCCAAGTGATATAATCTACGGCATTATTATTACATTTAT
AACAATACTGATAGGTAAGTTAATTTATCGCATCTTTGCAAATCATATAATAAGAAAGATCGGGGATTTTCTATTAATGA
GGCAGTAA

Upstream 100 bases:

>100_bases
GAAGGAGATGTGCAAGTACTACAATCGCACCCGATCACCGGTACGCCTATAGATGCTCCACACCCAAGTATTGTTACTTG
TAACATAAATATTTAAAATA

Downstream 100 bases:

>100_bases
TTAAGAAAAAACATATAAAAAACTTGTTTTTTAATCTTGAAAGTTTTTAATATGCACGCTACAATGTAGCTACATTATTG
AAAGAAGATTTTTATGTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MFEVFYNFCGLNQEIFLFLNKITNIGFIPYFFKIISFCFNIANFALIYILYCIYFYIQLKKTKNDKKRQNKFWHNYNKLV
EIGIIYGVFGLIFTALKFSVNFPRPYCSLPVDSFMTIINTANERCFSSFPSSHAALSVLVTYFAWNYIKLPLKILMICVI
MLVSLSRISLAMHYPSDIIYGIIITFITILIGKLIYRIFANHIIRKIGDFLLMRQ

Sequences:

>Translated_215_residues
MFEVFYNFCGLNQEIFLFLNKITNIGFIPYFFKIISFCFNIANFALIYILYCIYFYIQLKKTKNDKKRQNKFWHNYNKLV
EIGIIYGVFGLIFTALKFSVNFPRPYCSLPVDSFMTIINTANERCFSSFPSSHAALSVLVTYFAWNYIKLPLKILMICVI
MLVSLSRISLAMHYPSDIIYGIIITFITILIGKLIYRIFANHIIRKIGDFLLMRQ
>Mature_215_residues
MFEVFYNFCGLNQEIFLFLNKITNIGFIPYFFKIISFCFNIANFALIYILYCIYFYIQLKKTKNDKKRQNKFWHNYNKLV
EIGIIYGVFGLIFTALKFSVNFPRPYCSLPVDSFMTIINTANERCFSSFPSSHAALSVLVTYFAWNYIKLPLKILMICVI
MLVSLSRISLAMHYPSDIIYGIIITFITILIGKLIYRIFANHIIRKIGDFLLMRQ

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25310; Mature: 25310

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEVFYNFCGLNQEIFLFLNKITNIGFIPYFFKIISFCFNIANFALIYILYCIYFYIQLK
CHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTKNDKKRQNKFWHNYNKLVEIGIIYGVFGLIFTALKFSVNFPRPYCSLPVDSFMTIINT
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
ANERCFSSFPSSHAALSVLVTYFAWNYIKLPLKILMICVIMLVSLSRISLAMHYPSDIIY
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
GIIITFITILIGKLIYRIFANHIIRKIGDFLLMRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFEVFYNFCGLNQEIFLFLNKITNIGFIPYFFKIISFCFNIANFALIYILYCIYFYIQLK
CHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTKNDKKRQNKFWHNYNKLVEIGIIYGVFGLIFTALKFSVNFPRPYCSLPVDSFMTIINT
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
ANERCFSSFPSSHAALSVLVTYFAWNYIKLPLKILMICVIMLVSLSRISLAMHYPSDIIY
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
GIIITFITILIGKLIYRIFANHIIRKIGDFLLMRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA