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The map label for this gene is ybaB [C]

Identifier: 229587234

GI number: 229587234

Start: 1251482

End: 1251805

Strand: Direct

Name: ybaB [C]

Synonym: RAF_ORF1224

Alternate gene names: 229587234

Gene position: 1251482-1251805 (Clockwise)

Preceding gene: 229587233

Following gene: 229587239

Centisome position: 97.88

GC content: 34.88

Gene sequence:

>324_bases
ATGGTAAATTTTAATCAGTTTTTAAAGCAAGCCCAATCAATGCAAAAGAAAATGCAAGAAGCTCAAGAGCAAATGGCAAA
TGCAAGATATACCGGTAAAGCCGGCGGCGGACTTGTTGAGGTTATTGCAACCGGTAAAGGCGAAGTTGAAAAGATTTCAA
TTGATGAATCTTTATTAAAAGCAGAAGAAAAAGAAATGCTTGAGGATTTAATTAAAGTTGCCTTTAATGATGCTCAACAA
AAATGTGATGAAGATTCTCAAAATTCTTTATCAGGAGCTTTAAACGGTATGAGATTACCACCAGGCTTTAAAATGCCGTT
TTAA

Upstream 100 bases:

>100_bases
ATTGAAGCAAGTAACGATTTTGGTTTAATTAAAAAACATTTCCCAAATATAACAATTTCGGATATTTTACTTAAAAGCTA
AAAATATATAGGATAGAATT

Downstream 100 bases:

>100_bases
CACGACTCTTATGTCATTCTTGCAAAAATCGTGTTGAGTGGATACAAGTCGTCATTGCACGCGAACGTTAGTGAGCGTGG
CAATCTCAGGAATTCTTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MVNFNQFLKQAQSMQKKMQEAQEQMANARYTGKAGGGLVEVIATGKGEVEKISIDESLLKAEEKEMLEDLIKVAFNDAQQ
KCDEDSQNSLSGALNGMRLPPGFKMPF

Sequences:

>Translated_107_residues
MVNFNQFLKQAQSMQKKMQEAQEQMANARYTGKAGGGLVEVIATGKGEVEKISIDESLLKAEEKEMLEDLIKVAFNDAQQ
KCDEDSQNSLSGALNGMRLPPGFKMPF
>Mature_107_residues
MVNFNQFLKQAQSMQKKMQEAQEQMANARYTGKAGGGLVEVIATGKGEVEKISIDESLLKAEEKEMLEDLIKVAFNDAQQ
KCDEDSQNSLSGALNGMRLPPGFKMPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=101, Percent_Identity=48.5148514851485, Blast_Score=100, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1224_RICAE (C3PM02)

Other databases:

- EMBL:   CP001612
- RefSeq:   YP_002845735.1
- ProteinModelPortal:   C3PM02
- SMR:   C3PM02
- GeneID:   7815494
- GenomeReviews:   CP001612_GR
- KEGG:   raf:RAF_ORF1224
- OMA:   MLQDLIL
- ProtClustDB:   PRK00153
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11830; Mature: 11830

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNFNQFLKQAQSMQKKMQEAQEQMANARYTGKAGGGLVEVIATGKGEVEKISIDESLLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEECHHHHHHH
AEEKEMLEDLIKVAFNDAQQKCDEDSQNSLSGALNGMRLPPGFKMPF
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MVNFNQFLKQAQSMQKKMQEAQEQMANARYTGKAGGGLVEVIATGKGEVEKISIDESLLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEECHHHHHHH
AEEKEMLEDLIKVAFNDAQQKCDEDSQNSLSGALNGMRLPPGFKMPF
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA