Click here to switch to the map view.

The map label for this gene is 229587151

Identifier: 229587151

GI number: 229587151

Start: 1136997

End: 1137755

Strand: Direct

Name: 229587151

Synonym: RAF_ORF1114

Alternate gene names: NA

Gene position: 1136997-1137755 (Clockwise)

Preceding gene: 229587150

Following gene: 229587152

Centisome position: 88.93

GC content: 29.25

Gene sequence:

>759_bases
TTGCACTCTGTCATACCGTGGTCTTGCCACGGTATCCATATACTAAACAAAAATTATTTATTGATTCTCCTACGCCAATG
GCGTATAATTATTATGAGTAAAAAACTGATTTTAGTTGTTGAGCTTCCAGAGTTTCAAAAATTCGCTAAGAATAATTTAA
ATGAAAAAGAATGCTTTGAAATAATACATTACATTGCTGCTAATCCTGACCAAGGTGATATAATAAAAGGCACTGGAGGT
ATAAGAAGAAAGTTACGATTTACTTTAAGTAGTAATAATAAAGATAAAAGTGGCAGTATAAGAATAATTTATTTTTACTA
CAATGAAAATATGCCGGTATTTTTAATAACCGGTTTTATAAAAAGTAAGATGGAAAATATTAATCATAATAGTTGTAATG
AATTAAAAAAACTAACTGAAGAATTGGAAAATTATATGTCGGACCAGGCAAAAATAAATAATAAAAATACTACTCAAACC
GACAAAAGTATATTAATTGGAATGCAAGAGGCTGTTTTATACACTAAAGGAAAATTAAAAGCAAATAAACATGATATAAA
ATTATCTAATATAGACGTGCATGAAGCAAGAGATAAGTTAAAATTAACACAACAACAATTTGCTACAACATTTGGAGTGA
GTGTTGCAACTTTAAGAAACTGGGAACAAGGCAGAAGATTACCTACCGGAGCTGCAAAATTACTTCTTAAGATTATTGAG
AAAGAACCTAATGTTGTGAAACGAGTTTTACGAGGATAA

Upstream 100 bases:

>100_bases
AAAAAGTAGAAAACAAGGAAGAAATACGCAAAGAACTAGAAAGCTTATTTATTCCGATGATCAAGAAATTTTCTTCTAAT
GCTTTGTTGGTGTAGCTAAT

Downstream 100 bases:

>100_bases
AATAGAGATAAGACACAACCTATATAAACACCATGCCTATATTTTTTTATTTATTTGCAACATTAATAACTATCAGTAGC
GTATGCGTTGTCTTAAGCAA

Product: Putative transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator; Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain Protein; Transcriptional Regulator Xre; RelE Protein

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MHSVIPWSCHGIHILNKNYLLILLRQWRIIIMSKKLILVVELPEFQKFAKNNLNEKECFEIIHYIAANPDQGDIIKGTGG
IRRKLRFTLSSNNKDKSGSIRIIYFYYNENMPVFLITGFIKSKMENINHNSCNELKKLTEELENYMSDQAKINNKNTTQT
DKSILIGMQEAVLYTKGKLKANKHDIKLSNIDVHEARDKLKLTQQQFATTFGVSVATLRNWEQGRRLPTGAAKLLLKIIE
KEPNVVKRVLRG

Sequences:

>Translated_252_residues
MHSVIPWSCHGIHILNKNYLLILLRQWRIIIMSKKLILVVELPEFQKFAKNNLNEKECFEIIHYIAANPDQGDIIKGTGG
IRRKLRFTLSSNNKDKSGSIRIIYFYYNENMPVFLITGFIKSKMENINHNSCNELKKLTEELENYMSDQAKINNKNTTQT
DKSILIGMQEAVLYTKGKLKANKHDIKLSNIDVHEARDKLKLTQQQFATTFGVSVATLRNWEQGRRLPTGAAKLLLKIIE
KEPNVVKRVLRG
>Mature_252_residues
MHSVIPWSCHGIHILNKNYLLILLRQWRIIIMSKKLILVVELPEFQKFAKNNLNEKECFEIIHYIAANPDQGDIIKGTGG
IRRKLRFTLSSNNKDKSGSIRIIYFYYNENMPVFLITGFIKSKMENINHNSCNELKKLTEELENYMSDQAKINNKNTTQT
DKSILIGMQEAVLYTKGKLKANKHDIKLSNIDVHEARDKLKLTQQQFATTFGVSVATLRNWEQGRRLPTGAAKLLLKIIE
KEPNVVKRVLRG

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29095; Mature: 29095

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSVIPWSCHGIHILNKNYLLILLRQWRIIIMSKKLILVVELPEFQKFAKNNLNEKECFE
CCCCCCCCCCEEEEECCCEEEEEEECCEEEEEECCEEEEEECCHHHHHHHCCCCHHHHHH
IIHYIAANPDQGDIIKGTGGIRRKLRFTLSSNNKDKSGSIRIIYFYYNENMPVFLITGFI
HHHHHHCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEHHHH
KSKMENINHNSCNELKKLTEELENYMSDQAKINNKNTTQTDKSILIGMQEAVLYTKGKLK
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEHHHHHEEECCCCC
ANKHDIKLSNIDVHEARDKLKLTQQQFATTFGVSVATLRNWEQGRRLPTGAAKLLLKIIE
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHCCCCCCHHHHHHHHHHH
KEPNVVKRVLRG
CCHHHHHHHHCC
>Mature Secondary Structure
MHSVIPWSCHGIHILNKNYLLILLRQWRIIIMSKKLILVVELPEFQKFAKNNLNEKECFE
CCCCCCCCCCEEEEECCCEEEEEEECCEEEEEECCEEEEEECCHHHHHHHCCCCHHHHHH
IIHYIAANPDQGDIIKGTGGIRRKLRFTLSSNNKDKSGSIRIIYFYYNENMPVFLITGFI
HHHHHHCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEHHHH
KSKMENINHNSCNELKKLTEELENYMSDQAKINNKNTTQTDKSILIGMQEAVLYTKGKLK
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEHHHHHEEECCCCC
ANKHDIKLSNIDVHEARDKLKLTQQQFATTFGVSVATLRNWEQGRRLPTGAAKLLLKIIE
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHCCCCCCHHHHHHHHHHH
KEPNVVKRVLRG
CCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA