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The map label for this gene is nuoJ [H]

Identifier: 229587152

GI number: 229587152

Start: 1137788

End: 1138405

Strand: Direct

Name: nuoJ [H]

Synonym: RAF_ORF1115

Alternate gene names: 229587152

Gene position: 1137788-1138405 (Clockwise)

Preceding gene: 229587151

Following gene: 229587153

Centisome position: 88.99

GC content: 30.26

Gene sequence:

>618_bases
ATGCCTATATTTTTTTATTTATTTGCAACATTAATAACTATCAGTAGCGTATGCGTTGTCTTAAGCAAAAATTCCGTATA
TTCGGTATTATGGTTAATTTTTGCATTTATCAACGGTGCAGGGCTTATGATTTTGCTTGGAGCAGAATTTTTAGCTATGA
TGCTGATAGTAATTTATGTTGGAGCTGTAGCAGTATTATTCTTATTTGTGATAATGATGCTAGATATGCATTTTAATAAG
AAAATAACGCAGCTAAAAGCAAATCTAGCTTTAAGTATTTTTATAGCTTTGATTATGTTTGCCGATTTAGTAATAATTAT
TTTACTTGGTACTAAAAATATTAATTTCAACTCCAATGTATCGTTTACCATAACAAATAATATCTCAAATACTAAAGCAA
TAGGAGGCGTACTCTACACAGACTTTATGCTACCGTTTCAAATGGCGGGCCTTATATTATTTGTCGCTATGATTGCATGT
ATTACGTTAACACTAAAGAAGCGTGAGGGAGTAAAACGTCAAGATATATCAAAACAACTACGTCACAATAAAGAAAATAC
CGTATTAATGACAAAGCCTATTCTAAATAAAGGTGTTGAGAATATTAAATATGAATGA

Upstream 100 bases:

>100_bases
CTGCAAAATTACTTCTTAAGATTATTGAGAAAGAACCTAATGTTGTGAAACGAGTTTTACGAGGATAAAATAGAGATAAG
ACACAACCTATATAAACACC

Downstream 100 bases:

>100_bases
ATATATTTCGCTTAATCATTATTTAATCTTAAGCAGCTTAGTTTTTACTATCGGAATGTTTGGATTATTTATGCATCGCA
AAAATATTATCAATATATTA

Product: NADH dehydrogenase subunit J

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MPIFFYLFATLITISSVCVVLSKNSVYSVLWLIFAFINGAGLMILLGAEFLAMMLIVIYVGAVAVLFLFVIMMLDMHFNK
KITQLKANLALSIFIALIMFADLVIIILLGTKNINFNSNVSFTITNNISNTKAIGGVLYTDFMLPFQMAGLILFVAMIAC
ITLTLKKREGVKRQDISKQLRHNKENTVLMTKPILNKGVENIKYE

Sequences:

>Translated_205_residues
MPIFFYLFATLITISSVCVVLSKNSVYSVLWLIFAFINGAGLMILLGAEFLAMMLIVIYVGAVAVLFLFVIMMLDMHFNK
KITQLKANLALSIFIALIMFADLVIIILLGTKNINFNSNVSFTITNNISNTKAIGGVLYTDFMLPFQMAGLILFVAMIAC
ITLTLKKREGVKRQDISKQLRHNKENTVLMTKPILNKGVENIKYE
>Mature_204_residues
PIFFYLFATLITISSVCVVLSKNSVYSVLWLIFAFINGAGLMILLGAEFLAMMLIVIYVGAVAVLFLFVIMMLDMHFNKK
ITQLKANLALSIFIALIMFADLVIIILLGTKNINFNSNVSFTITNNISNTKAIGGVLYTDFMLPFQMAGLILFVAMIACI
TLTLKKREGVKRQDISKQLRHNKENTVLMTKPILNKGVENIKYE

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cyto

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=191, Percent_Identity=25.6544502617801, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 22944; Mature: 22813

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIFFYLFATLITISSVCVVLSKNSVYSVLWLIFAFINGAGLMILLGAEFLAMMLIVIYV
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GAVAVLFLFVIMMLDMHFNKKITQLKANLALSIFIALIMFADLVIIILLGTKNINFNSNV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
SFTITNNISNTKAIGGVLYTDFMLPFQMAGLILFVAMIACITLTLKKREGVKRQDISKQL
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RHNKENTVLMTKPILNKGVENIKYE
HCCCCCEEEEECHHHHCCHHHCCCC
>Mature Secondary Structure 
PIFFYLFATLITISSVCVVLSKNSVYSVLWLIFAFINGAGLMILLGAEFLAMMLIVIYV
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GAVAVLFLFVIMMLDMHFNKKITQLKANLALSIFIALIMFADLVIIILLGTKNINFNSNV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
SFTITNNISNTKAIGGVLYTDFMLPFQMAGLILFVAMIACITLTLKKREGVKRQDISKQL
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RHNKENTVLMTKPILNKGVENIKYE
HCCCCCEEEEECHHHHCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]