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The map label for this gene is perM [C]

Identifier: 229586979

GI number: 229586979

Start: 925606

End: 926676

Strand: Direct

Name: perM [C]

Synonym: RAF_ORF0879

Alternate gene names: 229586979

Gene position: 925606-926676 (Clockwise)

Preceding gene: 229586978

Following gene: 229586980

Centisome position: 72.4

GC content: 26.33

Gene sequence:

>1071_bases
ATGAGGAAAATAATAATGAATAGAACCGTTATATTTTGGCTAGTTTTTTTAGGGCTTTTTATCAGCGGTTTTATGCTAAT
TTCAGACGCAGTAAAACCATTTTTTATCGCATTTATAATATCTTACTTACTACAACCTGCTATAGGTTTTATCACATCAA
AATTTAAAATATCAAATAAATTTGCATCAAGCATAATTTATCTGATATTTTTGAGCATATTTTTCTTAAGCTTAACTATT
TTAGTGCCGATAATTTATGGACAAATTTTTACTTTTATAAATAATATTCCAAAATATAACAATTATTTACAGGCAGAAAT
ATTACCGCCTATAATGGTAAAAATTTATTCGATAGAACCTGATATTGCCGATAAAATCAAGAATTCTTTAAGCAATTTTA
TAAATAGTATATTTACTATACTTGGCAGTATTGCTAATAATTTTTGGCGTTATACTATTATAACTATTAACATATTTGTT
TTATTTTTACTTATACCTATAATATTATTCTATTTCCTACGTGATTGGGCTAAAATTATTGCAAACATGAAATCATTATT
ACCTATAAAAACCCGACCGAAAATCCTTGAAATATTATCGGCAATTAATAATCTGTTATCTGCTTACATAAGAGGACAGC
TAAATATTTGCTTATTATTATCTACTTATTATAGTATTGCATTTACCGTAATAGGTATTGATCTCGCTCTTTTACTTGGC
ATTTTAACAGGATTTTTAGTTATTATTCCTTTCCTTGGTACTTTTATATCGTTTCTTTTAACTCTAATTATCGGCTATTT
AACTTTTGGTGTAACTACTAAATTACTATATATAATGATAATTTATCTAGTTGGAAATATTTGCGAGTCTTATATTTTCA
CCCCTAAAATTATCGGTGATAAAATAGGGTTGCATCCTCTTTGGATTATATTCTCAATTTTTGCCTGCGGCAGCTTATTT
GGAATTATTGGAATATTTTTTGCTATACCGATTGCAGGGATTACAAAAATTTTACTTTTGAATCTAATTAAATTTTATAA
ATCTAGCAAATTCTATCGAATAGACGACTAA

Upstream 100 bases:

>100_bases
GTCGTTTTATAAGAACTTCAATTCTCACGTATTAAATATATGCTGTGATCTTCGCCTTGTGAACTCCTAGCTCTTCTTGC
AGTTGATCTTCGTATAGAAA

Downstream 100 bases:

>100_bases
AAAATTCTTATAACAGTGCAGCAATATATATTTCGTTTTACTACTTCTAGTAAATATCATCCTGATGAATTTATTGTTTC
TAGTTCTAACGATCAAGCTT

Product: Permease PerM-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MRKIIMNRTVIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGFITSKFKISNKFASSIIYLIFLSIFFLSLTI
LVPIIYGQIFTFINNIPKYNNYLQAEILPPIMVKIYSIEPDIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFV
LFLLIPIILFYFLRDWAKIIANMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG
ILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTPKIIGDKIGLHPLWIIFSIFACGSLF
GIIGIFFAIPIAGITKILLLNLIKFYKSSKFYRIDD

Sequences:

>Translated_356_residues
MRKIIMNRTVIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGFITSKFKISNKFASSIIYLIFLSIFFLSLTI
LVPIIYGQIFTFINNIPKYNNYLQAEILPPIMVKIYSIEPDIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFV
LFLLIPIILFYFLRDWAKIIANMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG
ILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTPKIIGDKIGLHPLWIIFSIFACGSLF
GIIGIFFAIPIAGITKILLLNLIKFYKSSKFYRIDD
>Mature_356_residues
MRKIIMNRTVIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGFITSKFKISNKFASSIIYLIFLSIFFLSLTI
LVPIIYGQIFTFINNIPKYNNYLQAEILPPIMVKIYSIEPDIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFV
LFLLIPIILFYFLRDWAKIIANMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG
ILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTPKIIGDKIGLHPLWIIFSIFACGSLF
GIIGIFFAIPIAGITKILLLNLIKFYKSSKFYRIDD

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=327, Percent_Identity=26.2996941896024, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40557; Mature: 40557

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIIMNRTVIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGFITSKFKISNK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FASSIIYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYNNYLQAEILPPIMVKIYSIEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHCCCC
DIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWAKII
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTPKIIGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
KIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSKFYRIDD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MRKIIMNRTVIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGFITSKFKISNK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FASSIIYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYNNYLQAEILPPIMVKIYSIEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHCCCC
DIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWAKII
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTPKIIGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
KIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSKFYRIDD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]