Click here to switch to the map view.

The map label for this gene is traX

Identifier: 229586930

GI number: 229586930

Start: 854022

End: 854774

Strand: Direct

Name: traX

Synonym: RAF_ORF0816

Alternate gene names: NA

Gene position: 854022-854774 (Clockwise)

Preceding gene: 229586929

Following gene: 229586931

Centisome position: 66.8

GC content: 28.02

Gene sequence:

>753_bases
ATGATAATAACAACAAATAAGCACCAATCAAATTATCAGGATTGGCTAAAAGCCTTAGCTATTATAACCATGATCATTGA
TCATGTAGGTTTATATCTATATCCTGAATTAACGATTATGCGGATCATAGGTCGTACAGCTATGCCAGTATTTTGCTTTT
TTGCCGGTTATAATTTTCATGATAAACCAAAAACCCATATAATAATATTCGGTGTTTTATTACAAATATATACTACTGTA
CTATTTAAACAGTTTCTTACTACAAATATTCTAATCTCTATCTATTTAGGGCAATGGTATATTTATTATTTTCGTAATTC
TTTAACTCGCTTTTTCTATAGCGGTTATTGTCATGCAATTATAATGGTACTATTGTGGTATATTAGCTGGCCTTTAATTG
ATTACGGGACTTTTGTAATTGCTACAATGATACTTGGATTTATTTCAAAACATGAGCAGGCAAACTTAAAACTTTGCTGT
TTTATAGCAATTTTTGCTTCTTTCGTGCATTCAACTCTTTTTACTCTTGCGATTTCCTTTAATGAGTTTAATTTTTCAAA
TACTGACTTAATTTTAAACCTCACTTTCTTAACAATTACCTATATATTAATGATCCTAAGCGATTATTCACAAAAAATAG
CTATAAATCTAAAATGGATAAGTCGCAATGTTTTATATATTTACTGCATACACATTATGATCTTACAATTCATATTCATC
TATAAATACACATATGGTTTTAAAAATTGGTAA

Upstream 100 bases:

>100_bases
TCGGAATATTTACTGATTAAAGTCTGTATGCTAGGTAGTACAATTGCAGTTGGAATGGGAGCATTTTTCGGCACTGCATA
TTTATTAAAAACGGTTAATT

Downstream 100 bases:

>100_bases
ATAAACATTAATAATGAGTGACAGCGTAATTTAGTTAATATTAATATATTTAAATAAATTGATAATTAAATATATGAATA
TAATAGATCGTTTAATTTTG

Product: F pilin acetylation protein TraX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MIITTNKHQSNYQDWLKALAIITMIIDHVGLYLYPELTIMRIIGRTAMPVFCFFAGYNFHDKPKTHIIIFGVLLQIYTTV
LFKQFLTTNILISIYLGQWYIYYFRNSLTRFFYSGYCHAIIMVLLWYISWPLIDYGTFVIATMILGFISKHEQANLKLCC
FIAIFASFVHSTLFTLAISFNEFNFSNTDLILNLTFLTITYILMILSDYSQKIAINLKWISRNVLYIYCIHIMILQFIFI
YKYTYGFKNW

Sequences:

>Translated_250_residues
MIITTNKHQSNYQDWLKALAIITMIIDHVGLYLYPELTIMRIIGRTAMPVFCFFAGYNFHDKPKTHIIIFGVLLQIYTTV
LFKQFLTTNILISIYLGQWYIYYFRNSLTRFFYSGYCHAIIMVLLWYISWPLIDYGTFVIATMILGFISKHEQANLKLCC
FIAIFASFVHSTLFTLAISFNEFNFSNTDLILNLTFLTITYILMILSDYSQKIAINLKWISRNVLYIYCIHIMILQFIFI
YKYTYGFKNW
>Mature_250_residues
MIITTNKHQSNYQDWLKALAIITMIIDHVGLYLYPELTIMRIIGRTAMPVFCFFAGYNFHDKPKTHIIIFGVLLQIYTTV
LFKQFLTTNILISIYLGQWYIYYFRNSLTRFFYSGYCHAIIMVLLWYISWPLIDYGTFVIATMILGFISKHEQANLKLCC
FIAIFASFVHSTLFTLAISFNEFNFSNTDLILNLTFLTITYILMILSDYSQKIAINLKWISRNVLYIYCIHIMILQFIFI
YKYTYGFKNW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008875 [H]

Pfam domain/function: PF05857 TraX [H]

EC number: NA

Molecular weight: Translated: 29663; Mature: 29663

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIITTNKHQSNYQDWLKALAIITMIIDHVGLYLYPELTIMRIIGRTAMPVFCFFAGYNFH
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DKPKTHIIIFGVLLQIYTTVLFKQFLTTNILISIYLGQWYIYYFRNSLTRFFYSGYCHAI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMVLLWYISWPLIDYGTFVIATMILGFISKHEQANLKLCCFIAIFASFVHSTLFTLAISF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE
NEFNFSNTDLILNLTFLTITYILMILSDYSQKIAINLKWISRNVLYIYCIHIMILQFIFI
CCCCCCCCHHEEEHHHHHHHHHHHHHHCCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHH
YKYTYGFKNW
HHHHCCCCCC
>Mature Secondary Structure
MIITTNKHQSNYQDWLKALAIITMIIDHVGLYLYPELTIMRIIGRTAMPVFCFFAGYNFH
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DKPKTHIIIFGVLLQIYTTVLFKQFLTTNILISIYLGQWYIYYFRNSLTRFFYSGYCHAI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMVLLWYISWPLIDYGTFVIATMILGFISKHEQANLKLCCFIAIFASFVHSTLFTLAISF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE
NEFNFSNTDLILNLTFLTITYILMILSDYSQKIAINLKWISRNVLYIYCIHIMILQFIFI
CCCCCCCCHHEEEHHHHHHHHHHHHHHCCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHH
YKYTYGFKNW
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]