Definition Rickettsia africae ESF-5 chromosome, complete genome.
Accession NC_012633
Length 1,278,540

Click here to switch to the map view.

The map label for this gene is 229586931

Identifier: 229586931

GI number: 229586931

Start: 854848

End: 855450

Strand: Direct

Name: 229586931

Synonym: RAF_ORF0817

Alternate gene names: NA

Gene position: 854848-855450 (Clockwise)

Preceding gene: 229586930

Following gene: 229586934

Centisome position: 66.86

GC content: 28.86

Gene sequence:

>603_bases
ATGAATATAATAGATCGTTTAATTTTGGATAATGAACAATATAAAGAGCAATTTAAAAAAAACAAACTATTTAAAATTAA
GTTAGATAGTACGCTACGAAAAAATAAATTTCTTAAACATTTTCGGATTTGGTCATACGAATTTCAAAAAATGGTATTAG
CAAGAGTAGTGTTTTCTGAAACAAAAGAATTTCAACAACTTGCATGGGAGCATCTTACCGATGAATTTGGACATAATATA
GAATTATTCCAAAATTTAGAAAATAATGAAGAAACTACAGATTCTATTTTTGAGGCCTTAGGTTCTTGGTTTACGCTAAA
AATGATGACTCTTGGAGATAGTGAAAGAGCCGTCCTTGTCCATTTAGTAATAGAGTCTTGTGCTACTATATTTTATGCAA
AACTAGGATCAATATTTTTTAATCATAAAGCAGCAAAACATTTCAAAACACATATGTATCTTGATCCTGAACATGAACAA
ATGGGAATAGATTTATTAAAACAAATAAACATTAATGATTCTTCTTTACTCACTATTCAAAAAAAAGGCTGGGATATGAT
TGACGCTCTGTTTACTAGACTTGCTGAAATCACACAGGATTAG

Upstream 100 bases:

>100_bases
TACACATATGGTTTTAAAAATTGGTAAATAAACATTAATAATGAGTGACAGCGTAATTTAGTTAATATTAATATATTTAA
ATAAATTGATAATTAAATAT

Downstream 100 bases:

>100_bases
CTTTAACTTATAGTATTCTAGATTTTATAAAAAAGCTTGCTTGCATGGTACGGTTTTTCATCATTGCGAGCGACTGAAAG
GAGCACGGCAATCTCAGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MNIIDRLILDNEQYKEQFKKNKLFKIKLDSTLRKNKFLKHFRIWSYEFQKMVLARVVFSETKEFQQLAWEHLTDEFGHNI
ELFQNLENNEETTDSIFEALGSWFTLKMMTLGDSERAVLVHLVIESCATIFYAKLGSIFFNHKAAKHFKTHMYLDPEHEQ
MGIDLLKQININDSSLLTIQKKGWDMIDALFTRLAEITQD

Sequences:

>Translated_200_residues
MNIIDRLILDNEQYKEQFKKNKLFKIKLDSTLRKNKFLKHFRIWSYEFQKMVLARVVFSETKEFQQLAWEHLTDEFGHNI
ELFQNLENNEETTDSIFEALGSWFTLKMMTLGDSERAVLVHLVIESCATIFYAKLGSIFFNHKAAKHFKTHMYLDPEHEQ
MGIDLLKQININDSSLLTIQKKGWDMIDALFTRLAEITQD
>Mature_200_residues
MNIIDRLILDNEQYKEQFKKNKLFKIKLDSTLRKNKFLKHFRIWSYEFQKMVLARVVFSETKEFQQLAWEHLTDEFGHNI
ELFQNLENNEETTDSIFEALGSWFTLKMMTLGDSERAVLVHLVIESCATIFYAKLGSIFFNHKAAKHFKTHMYLDPEHEQ
MGIDLLKQININDSSLLTIQKKGWDMIDALFTRLAEITQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23730; Mature: 23730

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIDRLILDNEQYKEQFKKNKLFKIKLDSTLRKNKFLKHFRIWSYEFQKMVLARVVFSE
CCHHHHHHCCCHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKEFQQLAWEHLTDEFGHNIELFQNLENNEETTDSIFEALGSWFTLKMMTLGDSERAVLV
HHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCHHEEEEEEECCCCHHHHH
HLVIESCATIFYAKLGSIFFNHKAAKHFKTHMYLDPEHEQMGIDLLKQININDSSLLTIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCHHHHHHHHHHHCCCCCCEEEEEE
KKGWDMIDALFTRLAEITQD
CCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIIDRLILDNEQYKEQFKKNKLFKIKLDSTLRKNKFLKHFRIWSYEFQKMVLARVVFSE
CCHHHHHHCCCHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKEFQQLAWEHLTDEFGHNIELFQNLENNEETTDSIFEALGSWFTLKMMTLGDSERAVLV
HHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCHHEEEEEEECCCCHHHHH
HLVIESCATIFYAKLGSIFFNHKAAKHFKTHMYLDPEHEQMGIDLLKQININDSSLLTIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCHHHHHHHHHHHCCCCCCEEEEEE
KKGWDMIDALFTRLAEITQD
CCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]