| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is 229586882
Identifier: 229586882
GI number: 229586882
Start: 788343
End: 788636
Strand: Direct
Name: 229586882
Synonym: RAF_ORF0753
Alternate gene names: NA
Gene position: 788343-788636 (Clockwise)
Preceding gene: 229586877
Following gene: 229586888
Centisome position: 61.66
GC content: 39.12
Gene sequence:
>294_bases ATGCGAATATTTGTAAAAGCAGCAATATCAACGGCTGCATGGAGATTTTATGCTCATCCTACAGTTGCTATGGGGATTTG TGTTGGAACAGCTCTTGCATATTCGCCGGAGAACACATTTGAGTTATTAAAAAATACGACTTATACAGGAATAGAAGCAG CAAAATTTGCTTATGAACATACAGCAGGAATAGTAAACGGAATAGCCGGCTTAGCTCATCTTGTGCATGATAACTTACCA AGCTACAGCAAAACTCCTCAAGTGGATCTAGTCGGTAGCATAGAAATTTCATGA
Upstream 100 bases:
>100_bases ATCTTGTTAGTAAGAATCTAGTTTGATACTCATAATACAAACATTTTCAATGTTATAAAGAATGTAAGTACTTTGTCAAT ACTTGATATATTAGATTATC
Downstream 100 bases:
>100_bases GTAGATGCTGTTGCATAAATCTCTAAAATAGCCAATAACTAAAAAAACTGATTATGTCATTCCTGCAAACCAGAGACGTT GTTGCATAAATCGGTGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MRIFVKAAISTAAWRFYAHPTVAMGICVGTALAYSPENTFELLKNTTYTGIEAAKFAYEHTAGIVNGIAGLAHLVHDNLP SYSKTPQVDLVGSIEIS
Sequences:
>Translated_97_residues MRIFVKAAISTAAWRFYAHPTVAMGICVGTALAYSPENTFELLKNTTYTGIEAAKFAYEHTAGIVNGIAGLAHLVHDNLP SYSKTPQVDLVGSIEIS >Mature_97_residues MRIFVKAAISTAAWRFYAHPTVAMGICVGTALAYSPENTFELLKNTTYTGIEAAKFAYEHTAGIVNGIAGLAHLVHDNLP SYSKTPQVDLVGSIEIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0416 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10415; Mature: 10415
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIFVKAAISTAAWRFYAHPTVAMGICVGTALAYSPENTFELLKNTTYTGIEAAKFAYEH CEEEEEEHHHHHHHHEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHH TAGIVNGIAGLAHLVHDNLPSYSKTPQVDLVGSIEIS HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure MRIFVKAAISTAAWRFYAHPTVAMGICVGTALAYSPENTFELLKNTTYTGIEAAKFAYEH CEEEEEEHHHHHHHHEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHH TAGIVNGIAGLAHLVHDNLPSYSKTPQVDLVGSIEIS HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]