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The map label for this gene is nsrR [H]

Identifier: 229586877

GI number: 229586877

Start: 785162

End: 785590

Strand: Direct

Name: nsrR [H]

Synonym: RAF_ORF0748

Alternate gene names: 229586877

Gene position: 785162-785590 (Clockwise)

Preceding gene: 229586871

Following gene: 229586882

Centisome position: 61.41

GC content: 27.74

Gene sequence:

>429_bases
ATGCAGTTAACAAGTTTTACCGATTACGGATTACGTAGCCTTATATATCTTGCTTCAAAACCGGAAAGAATTTGTAGTGT
AAAAGAGATATCAGAGTACCATAATATTTCCCTTAATCATTTGATAAAAGTGATTCATAGATTAGCACAATTAGGATATA
TTAATAGTAGTAAAGGAAAAGGAGGAGGAATTAAGCTAGCATTTAGCCCTTCTTCCATGAAGTTGGGAGATATAATAGAA
AAATTAGAACCTAATATGGATATAGTAGAATGTTTCAATAAAAATACTAATAGCTGCAAAATTACAAATTCATGCCAATT
TAAACATTTTATTAAAGAAGCAAGTGAAGCATTTATAAAAACATTGAATAATTATACATTAGAAGATGCAATGATTACTA
AAACAATTCAAATTAAGGATAAACTATAG

Upstream 100 bases:

>100_bases
ATAACCTTTACTATAATATACATTTAAAATACATATTATAGTAACTAGACTTATATAGACGTTTTTTTGTATATTCAAGA
TAAAAATAAATAAAATTTTT

Downstream 100 bases:

>100_bases
AAAAATAAGCGTTTTTCTTTTTCCGCATATTAAAAACTCTTGATTCCCCTTAGCTCCTAGTATTGGACTTGCTATTATAC
CGAATATTTTAAAATTATGC

Product: Putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MQLTSFTDYGLRSLIYLASKPERICSVKEISEYHNISLNHLIKVIHRLAQLGYINSSKGKGGGIKLAFSPSSMKLGDIIE
KLEPNMDIVECFNKNTNSCKITNSCQFKHFIKEASEAFIKTLNNYTLEDAMITKTIQIKDKL

Sequences:

>Translated_142_residues
MQLTSFTDYGLRSLIYLASKPERICSVKEISEYHNISLNHLIKVIHRLAQLGYINSSKGKGGGIKLAFSPSSMKLGDIIE
KLEPNMDIVECFNKNTNSCKITNSCQFKHFIKEASEAFIKTLNNYTLEDAMITKTIQIKDKL
>Mature_142_residues
MQLTSFTDYGLRSLIYLASKPERICSVKEISEYHNISLNHLIKVIHRLAQLGYINSSKGKGGGIKLAFSPSSMKLGDIIE
KLEPNMDIVECFNKNTNSCKITNSCQFKHFIKEASEAFIKTLNNYTLEDAMITKTIQIKDKL

Specific function: Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=130, Percent_Identity=43.8461538461538, Blast_Score=129, Evalue=8e-32,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16064; Mature: 16064

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTSFTDYGLRSLIYLASKPERICSVKEISEYHNISLNHLIKVIHRLAQLGYINSSKGK
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
GGGIKLAFSPSSMKLGDIIEKLEPNMDIVECFNKNTNSCKITNSCQFKHFIKEASEAFIK
CCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHH
TLNNYTLEDAMITKTIQIKDKL
HHCCCCCCHHHHHEEEEEECCC
>Mature Secondary Structure
MQLTSFTDYGLRSLIYLASKPERICSVKEISEYHNISLNHLIKVIHRLAQLGYINSSKGK
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
GGGIKLAFSPSSMKLGDIIEKLEPNMDIVECFNKNTNSCKITNSCQFKHFIKEASEAFIK
CCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHH
TLNNYTLEDAMITKTIQIKDKL
HHCCCCCCHHHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA