Click here to switch to the map view.

The map label for this gene is yaaA [C]

Identifier: 229586790

GI number: 229586790

Start: 683905

End: 684651

Strand: Direct

Name: yaaA [C]

Synonym: RAF_ORF0648

Alternate gene names: 229586790

Gene position: 683905-684651 (Clockwise)

Preceding gene: 229586789

Following gene: 229586791

Centisome position: 53.49

GC content: 29.85

Gene sequence:

>747_bases
ATGCTTGCTATTATTTCTTCTGCTAAAACTCTAAATTTCGAGAAGTTAGCTCCCAAGACGGAGCTGACGATTCCAATGTT
CCTTACGTTAACTAATAAACTACTTTCTACACTCCAAAGCTATTCTGAGAATCAATTATCGAAAATAATGAATATAAGTG
CAAAACTTGCACATATAAATAAAGAAAGATTTAAGGATTTTGATAATCAAGAGAGTAAAGCGGCTATTTTTGCTTATGCA
GGAGATGTTTTTAATAATATACATATAGAAAAATTAACTAATCATGCATTAAATTTCTTGCAATCACATTTGCTTATTAT
ATCAGGACTTTACGGGGGCTTAAAACCGCTAGATACTATTAAGCCGTATAGATTAGAAATGGCAACAAAATTAAATGAAA
TAAATTTAACAAACTTTTGGCAAGATGAAATCACTAATTATATTAATAAAATCCTTGCTAAACAGAAAAATAAATATTTA
CTCAACCTAGCATCACAAGAATATTCATCTGTAATAAACCCAAATAAACTTAAATATCAATTAGTTAACGTTCATTTTAA
AGAAAATAGGAACGGTAAATTATCAACAATCGGTATAAATGCTAAAAAAGCTCGAGGGGCGATGGTCAAGGTTATTGCTA
ACAACCTAATTGACTCACCTGAGCTACTTAAGAATTTCTCATATTTAGGTTATGCCTTTAGTACTAAACACTCATCCGAT
AACGAATTGGTGTTTATTAAGAGTTAA

Upstream 100 bases:

>100_bases
ACAGTGATCCAAGCTATGCAATCATGCAAACAATCGATAGTACTAACAGAAATATCGCTAGCACTACTTCATCTCTTCCG
AGTACTCCGGCTAGATAGAA

Downstream 100 bases:

>100_bases
AATAGTAGGGGTGAAATACCAATAGAAATGCTTCAAGTTATTAACTTTAATTAAAAAGTTAGTATTTTCTTTACAAAATA
GTGGGTTTACTTTATAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MLAIISSAKTLNFEKLAPKTELTIPMFLTLTNKLLSTLQSYSENQLSKIMNISAKLAHINKERFKDFDNQESKAAIFAYA
GDVFNNIHIEKLTNHALNFLQSHLLIISGLYGGLKPLDTIKPYRLEMATKLNEINLTNFWQDEITNYINKILAKQKNKYL
LNLASQEYSSVINPNKLKYQLVNVHFKENRNGKLSTIGINAKKARGAMVKVIANNLIDSPELLKNFSYLGYAFSTKHSSD
NELVFIKS

Sequences:

>Translated_248_residues
MLAIISSAKTLNFEKLAPKTELTIPMFLTLTNKLLSTLQSYSENQLSKIMNISAKLAHINKERFKDFDNQESKAAIFAYA
GDVFNNIHIEKLTNHALNFLQSHLLIISGLYGGLKPLDTIKPYRLEMATKLNEINLTNFWQDEITNYINKILAKQKNKYL
LNLASQEYSSVINPNKLKYQLVNVHFKENRNGKLSTIGINAKKARGAMVKVIANNLIDSPELLKNFSYLGYAFSTKHSSD
NELVFIKS
>Mature_248_residues
MLAIISSAKTLNFEKLAPKTELTIPMFLTLTNKLLSTLQSYSENQLSKIMNISAKLAHINKERFKDFDNQESKAAIFAYA
GDVFNNIHIEKLTNHALNFLQSHLLIISGLYGGLKPLDTIKPYRLEMATKLNEINLTNFWQDEITNYINKILAKQKNKYL
LNLASQEYSSVINPNKLKYQLVNVHFKENRNGKLSTIGINAKKARGAMVKVIANNLIDSPELLKNFSYLGYAFSTKHSSD
NELVFIKS

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family [H]

Homologues:

Organism=Escherichia coli, GI1786187, Length=252, Percent_Identity=40.0793650793651, Blast_Score=184, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005583 [H]

Pfam domain/function: PF03883 DUF328 [H]

EC number: NA

Molecular weight: Translated: 28162; Mature: 28162

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAIISSAKTLNFEKLAPKTELTIPMFLTLTNKLLSTLQSYSENQLSKIMNISAKLAHIN
CEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KERFKDFDNQESKAAIFAYAGDVFNNIHIEKLTNHALNFLQSHLLIISGLYGGLKPLDTI
HHHHHCCCCCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KPYRLEMATKLNEINLTNFWQDEITNYINKILAKQKNKYLLNLASQEYSSVINPNKLKYQ
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCEEEE
LVNVHFKENRNGKLSTIGINAKKARGAMVKVIANNLIDSPELLKNFSYLGYAFSTKHSSD
EEEEEEECCCCCEEEEEECCCHHHCCHHHHHHHHHCCCCHHHHHHHHHHCEEEECCCCCC
NELVFIKS
CCEEEEEC
>Mature Secondary Structure
MLAIISSAKTLNFEKLAPKTELTIPMFLTLTNKLLSTLQSYSENQLSKIMNISAKLAHIN
CEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KERFKDFDNQESKAAIFAYAGDVFNNIHIEKLTNHALNFLQSHLLIISGLYGGLKPLDTI
HHHHHCCCCCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KPYRLEMATKLNEINLTNFWQDEITNYINKILAKQKNKYLLNLASQEYSSVINPNKLKYQ
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCEEEE
LVNVHFKENRNGKLSTIGINAKKARGAMVKVIANNLIDSPELLKNFSYLGYAFSTKHSSD
EEEEEEECCCCCEEEEEECCCHHHCCHHHHHHHHHCCCCHHHHHHHHHHCEEEECCCCCC
NELVFIKS
CCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA