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The map label for this gene is yfiH [C]

Identifier: 229586762

GI number: 229586762

Start: 653643

End: 654365

Strand: Direct

Name: yfiH [C]

Synonym: RAF_ORF0616

Alternate gene names: 229586762

Gene position: 653643-654365 (Clockwise)

Preceding gene: 229586760

Following gene: 229586763

Centisome position: 51.12

GC content: 28.22

Gene sequence:

>723_bases
ATGGAAGGATTAATAAACGGATCAGTTTATTATAAAATTTTTGATAAAACATTCAATAATTCTAGTCATAGATATATAAA
AAAAAATAACTCTATAAATGAAACAGAAATAGTTGAAAACAAAAAATCTATTATTACTTATTTTAAAGCACAAGATATTT
TAATTTTAAACCAAGTACATGGCAATCAAATTGTTAATGCTGATGAGTCCATAATTGCCGTACCTGAAGCAGATGGCAGC
ATTACAACTAAGAAAAATTTAATATTAGCGGTACAATCAGCAGATTGTGTACCGGTATTACTTGCAAGCGGCGACGGTAA
AATAATCGGAGCGGCACATGCAGGTTGGAAAGGAAGTATAAATAATATTATTAGCAATATAGTTACTAAAATAACAGAAA
AAGGAGCAAAGAATTTAATAGCAGTGATAGGTCCTGCTATAGCTCAAAGTTCATATGAAGTTGATGATGAATATTATAAA
GCTTTCTTAAGTAAGGATATTAACAATAAACAGTTTTTTATAAACTCTATAAAAGAAAATCATTATATGTTTGATTTACC
GACTTTTGTAGAGTTAAAACTTAAAGAAGCAGGCGTCAAAGATATAAAAAATATTGCTGAAGATACTTACACAAATCCGT
TAAAATATCCAAGTAAAAGACGCTCATATCATTTGCAAGAACCTTATAATCAGAATATATTATCAGCTATCGTAATGAAA
TAA

Upstream 100 bases:

>100_bases
TTGATGAAATTGTGCTATTATTTTTTCTAGCTGTTTATTTTTTTGTAAACGACCGGATAAAGTATTAATAAAACTATTAT
AATTAATATGGGATATTTTC

Downstream 100 bases:

>100_bases
TGGCATTGCTAAATAAATATTGATGGTTTGAAAAAGCTACACCATTACAAGGATGCGTTGTTGCATGGACACTGAGTCAT
CATTGTGAGCAGCCGTAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MEGLINGSVYYKIFDKTFNNSSHRYIKKNNSINETEIVENKKSIITYFKAQDILILNQVHGNQIVNADESIIAVPEADGS
ITTKKNLILAVQSADCVPVLLASGDGKIIGAAHAGWKGSINNIISNIVTKITEKGAKNLIAVIGPAIAQSSYEVDDEYYK
AFLSKDINNKQFFINSIKENHYMFDLPTFVELKLKEAGVKDIKNIAEDTYTNPLKYPSKRRSYHLQEPYNQNILSAIVMK

Sequences:

>Translated_240_residues
MEGLINGSVYYKIFDKTFNNSSHRYIKKNNSINETEIVENKKSIITYFKAQDILILNQVHGNQIVNADESIIAVPEADGS
ITTKKNLILAVQSADCVPVLLASGDGKIIGAAHAGWKGSINNIISNIVTKITEKGAKNLIAVIGPAIAQSSYEVDDEYYK
AFLSKDINNKQFFINSIKENHYMFDLPTFVELKLKEAGVKDIKNIAEDTYTNPLKYPSKRRSYHLQEPYNQNILSAIVMK
>Mature_240_residues
MEGLINGSVYYKIFDKTFNNSSHRYIKKNNSINETEIVENKKSIITYFKAQDILILNQVHGNQIVNADESIIAVPEADGS
ITTKKNLILAVQSADCVPVLLASGDGKIIGAAHAGWKGSINNIISNIVTKITEKGAKNLIAVIGPAIAQSSYEVDDEYYK
AFLSKDINNKQFFINSIKENHYMFDLPTFVELKLKEAGVKDIKNIAEDTYTNPLKYPSKRRSYHLQEPYNQNILSAIVMK

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Escherichia coli, GI1788945, Length=193, Percent_Identity=30.0518134715026, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 26849; Mature: 26849

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGLINGSVYYKIFDKTFNNSSHRYIKKNNSINETEIVENKKSIITYFKAQDILILNQVH
CCCEECCEEEEEEEECCCCCCCCEEEECCCCCCHHHHHHCHHHEEEEEECCCEEEEEECC
GNQIVNADESIIAVPEADGSITTKKNLILAVQSADCVPVLLASGDGKIIGAAHAGWKGSI
CCEEECCCCCEEEEECCCCCEEECCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCH
NNIISNIVTKITEKGAKNLIAVIGPAIAQSSYEVDDEYYKAFLSKDINNKQFFINSIKEN
HHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCC
HYMFDLPTFVELKLKEAGVKDIKNIAEDTYTNPLKYPSKRRSYHLQEPYNQNILSAIVMK
CEEEECCCEEEEEEHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MEGLINGSVYYKIFDKTFNNSSHRYIKKNNSINETEIVENKKSIITYFKAQDILILNQVH
CCCEECCEEEEEEEECCCCCCCCEEEECCCCCCHHHHHHCHHHEEEEEECCCEEEEEECC
GNQIVNADESIIAVPEADGSITTKKNLILAVQSADCVPVLLASGDGKIIGAAHAGWKGSI
CCEEECCCCCEEEEECCCCCEEECCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCH
NNIISNIVTKITEKGAKNLIAVIGPAIAQSSYEVDDEYYKAFLSKDINNKQFFINSIKEN
HHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCC
HYMFDLPTFVELKLKEAGVKDIKNIAEDTYTNPLKYPSKRRSYHLQEPYNQNILSAIVMK
CEEEECCCEEEEEEHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]