| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is 229586745
Identifier: 229586745
GI number: 229586745
Start: 628862
End: 629257
Strand: Direct
Name: 229586745
Synonym: RAF_ORF0597
Alternate gene names: NA
Gene position: 628862-629257 (Clockwise)
Preceding gene: 229586744
Following gene: 229586746
Centisome position: 49.19
GC content: 35.35
Gene sequence:
>396_bases GTGACTAGGCTTTCTCAATATATTATGAGGTTACTTGAAGAGTTAAGGATTATCAACCTTGAATATATTTCAAACGAACA AGCGCTGGATTTAGGGCAGAATAAAAGGAGTATAGTAGACTTAAAAGTTCGAGATAACTCCGGCAATATTTATATTGTTG AGATGCAAGACGGCTATGCCGATGCTTCTTTAGCAAGAGTATCATTTTACAGTTGTATAGCATTTTCTTCGCAATTAAAA AGAGGACAAGAATATGTTGATCTAGCTCCTGTAGTAATGGTAGTAATTATTTCTGGATTTCAGGCATTGCCCGAGGAAAA AGAATGTATTAGCTATCATCAAACTATTAATGTCGGCAACGGTAAGCATCAACTTAAATGCTTGCGTATTTGTTGA
Upstream 100 bases:
>100_bases TACGAAGAATGCTTAGCTTGTCAGTAAGTATAACTATGCAAAGATATTTAGACCCAACAAATGATGTAGCATTTAAAAAA TTGTTTACGGATAAAACAAG
Downstream 100 bases:
>100_bases ATTAGACAAATTTACCAAAGAAGCAGATGAGTTAGAAAGCTTAGAAGATGATTGGTTATATATGATGGCTAAATTCGATA GAGCAAAAGAACCCCCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTRLSQYIMRLLEELRIINLEYISNEQALDLGQNKRSIVDLKVRDNSGNIYIVEMQDGYADASLARVSFYSCIAFSSQLK RGQEYVDLAPVVMVVIISGFQALPEEKECISYHQTINVGNGKHQLKCLRIC
Sequences:
>Translated_131_residues MTRLSQYIMRLLEELRIINLEYISNEQALDLGQNKRSIVDLKVRDNSGNIYIVEMQDGYADASLARVSFYSCIAFSSQLK RGQEYVDLAPVVMVVIISGFQALPEEKECISYHQTINVGNGKHQLKCLRIC >Mature_130_residues TRLSQYIMRLLEELRIINLEYISNEQALDLGQNKRSIVDLKVRDNSGNIYIVEMQDGYADASLARVSFYSCIAFSSQLKR GQEYVDLAPVVMVVIISGFQALPEEKECISYHQTINVGNGKHQLKCLRIC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14934; Mature: 14803
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLSQYIMRLLEELRIINLEYISNEQALDLGQNKRSIVDLKVRDNSGNIYIVEMQDGYA CCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCC DASLARVSFYSCIAFSSQLKRGQEYVDLAPVVMVVIISGFQALPEEKECISYHQTINVGN CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCC GKHQLKCLRIC CCCEEEEEECC >Mature Secondary Structure TRLSQYIMRLLEELRIINLEYISNEQALDLGQNKRSIVDLKVRDNSGNIYIVEMQDGYA CHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCC DASLARVSFYSCIAFSSQLKRGQEYVDLAPVVMVVIISGFQALPEEKECISYHQTINVGN CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCC GKHQLKCLRIC CCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA