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The map label for this gene is 229586725

Identifier: 229586725

GI number: 229586725

Start: 600788

End: 601717

Strand: Direct

Name: 229586725

Synonym: RAF_ORF0574

Alternate gene names: NA

Gene position: 600788-601717 (Clockwise)

Preceding gene: 229586724

Following gene: 229586726

Centisome position: 46.99

GC content: 31.61

Gene sequence:

>930_bases
ATGATAATCTTTAGTATAGTTTTTTTTAAAACCGTTTCGGTATTATTAAGTGTAGTAATAGGATTTTTAGCAGGTAAATA
TTCAAATGTTGAAAGAGATAGTATCTCTTCGTTACTATTCTATTTTATATCGCCTATAGTATTTTTTACGATACCTGCTA
GTACAACCTTAACACTTGCGGCATTAAGCGTTACGGTTGTAACATTTGTAATTGCAACACTCTTATCGCTCTTTTCTTAT
TATTTTTTTGGTAAATTTTGGCAGGATCATACACGTAATATTATAGCTTTGTCTGCAGGTACGGCCAATGGTGGGTATTT
TATGTTGCCTATAGCTGCAGCACTTTTTGATGATTATACATTAAGTATTTACATGATGGCTGTTATAGGAGTGAATATTT
ATGAATGTTCCATCGGCTTTTATATTTGTATGAGGAGCTTTGCTAATACCACCGATAGTATATTAAAAGTAGTAAAATTA
CCGATTTTAAACGCTTTTTTCTTGGGATGTTTATTTAGTTTTTGCGGTTTTACTTTACCGGATTTTTTAGATGATTTTAT
ATATAATATGAAAGGCTCTTTTTCGATACTCGGTATGGTGATGGTGGGTCTTGCTCTTTCGTCTCTACAAAAATTTGAAG
TCGATATCAAATTTACTCTTGCTACTTTTGCTGCTAAATTTCTATTCTATCCTTTGGGAGTAGGGTTATTGATCATGTTT
GATCATTTTGTAACAAAATGGTATAACAATGATTACTATAATGCCCTAAAACTACTTTCTACGGCACCACTCGCAGCAAA
TACTATAGTTATAGCGAATTTACAGAAATTTTACCCTGAAAAAGTTGCAGCTACTGTGTTTTTATCTTTGCTTTTTGTAG
TTATATATATGCCGACCATGGTCAGTATATTTTTAAGTGACTTAAATTAA

Upstream 100 bases:

>100_bases
AGAAATTTATTGTGGTCTGATGAAGTAAAAATCTTTACAAAATTTAGTGAAAAAAATAAAACCTCATATATTATAAGTAA
TTATATCTTTAGCTCATTAC

Downstream 100 bases:

>100_bases
TAACATGATGACAATTGATGACAATGATTTTTTTACAATTTATTCTAAATTGGTATTAATAGGTTCATATGAAAATTAAT
TCAATAAAAATTGGTCCCTA

Product: Putative permease

Products: NA

Alternate protein names: Permease; Auxin Efflux Carrier Family Protein

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MIIFSIVFFKTVSVLLSVVIGFLAGKYSNVERDSISSLLFYFISPIVFFTIPASTTLTLAALSVTVVTFVIATLLSLFSY
YFFGKFWQDHTRNIIALSAGTANGGYFMLPIAAALFDDYTLSIYMMAVIGVNIYECSIGFYICMRSFANTTDSILKVVKL
PILNAFFLGCLFSFCGFTLPDFLDDFIYNMKGSFSILGMVMVGLALSSLQKFEVDIKFTLATFAAKFLFYPLGVGLLIMF
DHFVTKWYNNDYYNALKLLSTAPLAANTIVIANLQKFYPEKVAATVFLSLLFVVIYMPTMVSIFLSDLN

Sequences:

>Translated_309_residues
MIIFSIVFFKTVSVLLSVVIGFLAGKYSNVERDSISSLLFYFISPIVFFTIPASTTLTLAALSVTVVTFVIATLLSLFSY
YFFGKFWQDHTRNIIALSAGTANGGYFMLPIAAALFDDYTLSIYMMAVIGVNIYECSIGFYICMRSFANTTDSILKVVKL
PILNAFFLGCLFSFCGFTLPDFLDDFIYNMKGSFSILGMVMVGLALSSLQKFEVDIKFTLATFAAKFLFYPLGVGLLIMF
DHFVTKWYNNDYYNALKLLSTAPLAANTIVIANLQKFYPEKVAATVFLSLLFVVIYMPTMVSIFLSDLN
>Mature_309_residues
MIIFSIVFFKTVSVLLSVVIGFLAGKYSNVERDSISSLLFYFISPIVFFTIPASTTLTLAALSVTVVTFVIATLLSLFSY
YFFGKFWQDHTRNIIALSAGTANGGYFMLPIAAALFDDYTLSIYMMAVIGVNIYECSIGFYICMRSFANTTDSILKVVKL
PILNAFFLGCLFSFCGFTLPDFLDDFIYNMKGSFSILGMVMVGLALSSLQKFEVDIKFTLATFAAKFLFYPLGVGLLIMF
DHFVTKWYNNDYYNALKLLSTAPLAANTIVIANLQKFYPEKVAATVFLSLLFVVIYMPTMVSIFLSDLN

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34496; Mature: 34496

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIFSIVFFKTVSVLLSVVIGFLAGKYSNVERDSISSLLFYFISPIVFFTIPASTTLTLA
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHH
ALSVTVVTFVIATLLSLFSYYFFGKFWQDHTRNIIALSAGTANGGYFMLPIAAALFDDYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCHH
LSIYMMAVIGVNIYECSIGFYICMRSFANTTDSILKVVKLPILNAFFLGCLFSFCGFTLP
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DFLDDFIYNMKGSFSILGMVMVGLALSSLQKFEVDIKFTLATFAAKFLFYPLGVGLLIMF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DHFVTKWYNNDYYNALKLLSTAPLAANTIVIANLQKFYPEKVAATVFLSLLFVVIYMPTM
HHHHHHHHCCCHHHHHHHHHCCCCHHCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSIFLSDLN
HHHHHHCCC
>Mature Secondary Structure
MIIFSIVFFKTVSVLLSVVIGFLAGKYSNVERDSISSLLFYFISPIVFFTIPASTTLTLA
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHH
ALSVTVVTFVIATLLSLFSYYFFGKFWQDHTRNIIALSAGTANGGYFMLPIAAALFDDYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCHH
LSIYMMAVIGVNIYECSIGFYICMRSFANTTDSILKVVKLPILNAFFLGCLFSFCGFTLP
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DFLDDFIYNMKGSFSILGMVMVGLALSSLQKFEVDIKFTLATFAAKFLFYPLGVGLLIMF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DHFVTKWYNNDYYNALKLLSTAPLAANTIVIANLQKFYPEKVAATVFLSLLFVVIYMPTM
HHHHHHHHCCCHHHHHHHHHCCCCHHCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSIFLSDLN
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA