| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is mltE1 [H]
Identifier: 229586672
GI number: 229586672
Start: 537754
End: 539715
Strand: Direct
Name: mltE1 [H]
Synonym: RAF_ORF0509
Alternate gene names: 229586672
Gene position: 537754-539715 (Clockwise)
Preceding gene: 229586671
Following gene: 229586673
Centisome position: 42.06
GC content: 31.04
Gene sequence:
>1962_bases ATGAAAATCATAATAAAATTGTTAACCTCTATATTGTTGTTATTAGCTTTGAAAGTAAATGCTAATTCTGATGCTGTAGA TAATGTTAAGCAAGTTTTTACCTATATCGATCAAAAAAATTGGTCACAAGCCGAAGATTTAGCTTTAGAAGTAAATAATA AAATTTTAACAAAAATTGTACTTTCTCAGAAATATTTAGATAATAAATATTCAGATAATAGTTTTGAACATGTAATAAGG TTTTTATGCAATAACCCGGATTGGCCTCAAAATAAGCTGCTTGAGGAAATAGCAGAAGAATATCTAAATAATAATACAAA TAAAAAAGTAATTGTTGATTGGTTTAGTAAACATTCTCCTCTTACCGGCAAAGGTTATAAATTTTATGCAGCAGCTGCAA GTAGTTTAATCAAAGATCAGAAGATATTACTACCTATTATTAAAGAGGCTTGGGTATACGCCAATTTCACTCCTGAAGAA GAAAATGCATATTACAATAAGTGGCATAAATATTTAACTGCGAGTGATCATTTAGAGCGAATAGAAGAACATTTATGGAA AAATGATATTAGATCTGCTGAGCAATCCCTGAAATATGTAGAGCAAGGTTACCGTAATTCTTTTAAAGTCCAAATTGCGA TTATAGGTAAATCGCCAAATGCTGAAAAGCTTTTTAAAAGTGTTCCTGAAAAATACTATACTTCCGGTTTATTATATCGT TATTTAGATTTTAAAAAAATGCAAAAGCCGACAAAGGAAATTATTACTTTGTTTAAGAAAGCTAAAAATAACCGTAAACA TTTTGCTAAATGGTGTCGTATTCAGTCCTATTATGCTCGTGAATTCATCGAGTACAAAGATTTTGCTAATAGCTATAGAA TGGCAACGCTTCCTTTTGCTACTTGTCCTGAAACTATAAGGGAGCAGGAGTGGCTTGCGGGCTGGCTTTCTTTAAGTTTT TTAAAAAAGCCTGATCAAGCATTAGTACATTTTAATAAGTTTATTAAAGTTGTTAAGACTCCGATTAGTTTGGCACGTGG GTTTTATTGGCTCGGTCGTACTTATGCAGCAAAAGGCGATAAGCAAATGGCTAGAAAATTTTACGAGCAGGCAGCTAAAT ATTCTTTTACCTTTTATGGGCAGGTAGCAAATATTGAATTAAATAGGACAAAGTTAGTTTTACCTTCTATTCCCGTAATA ACTTCTGAAGAAAGGAAAATTATAGAAAATAAAGAGATTATTAAAGCAATAAGGTTATTGGTTAAATATAATAAAAACTA CTTAGCCCTTATATATTCCAAAGCAGCAATGAAAAATACTAAAAATTCTGCAGAAATTCAAGTAATTGCGAATATTATTA AAGCCAATAATAATACTAATCATATGGTTGAGGTGGCAAAAATTGCTGCCCAAAATAATGCTTTTATTCTGGATTGTGCT TTTCCAACGCCTTATAATCTAGTAGGTTTGCCTATCCCACCTCATTTAACTTATGGAATAATTAGACAAGAATCGGTTTT TGATCATAAAGCAGTAAGTTATGCAAATGCTATGGGTCTCATGCAACTTATTAAAGGTACTGCTTGTGATACCGCAAGAT CCATAAATGTTAAATGTAATGTAGCAGACTTAACTAGAAATCCGGTATATAATATTAAACTTGGTGCGCATCATTTCAAA AAATTATTAGATAATCATAAAGGTTCTTATATTCTATCCATTGCTTCTTACAATGCCGGAAGTCATAATGTAGTAAAATG GATAGATAGGTTTGGTGATCCAAGGGATATAAAAGATACAAGAAAAGTTATTGACTGGATAGAACTTATACCTTATCGAG AAACAAGAGATTACGTTCAAAGAGTACTTGAAAATGTTCAGATTTATCGGGTAATCTTAAATAAGAATAGTAGTTTGTAC TTTAAGCGTGACTTACATGCTTGTGATATAGCAAAAAGTTAA
Upstream 100 bases:
>100_bases GATTCCTGCTTTCGCGGGAATGACATTAACGAGCCATGCAACAACGCTTTTAGTAGCTCGTAATGACTATTAGGTATCCA CGCAACAAATCATAAAACTT
Downstream 100 bases:
>100_bases TTTCTATTAGTGTTTTATTTTGACATATAGTAATATGTAAGTATAACACCGACACTAATTAAAAACTATGAATTAAGGAG GAGAGTATGAAAAAATTAGA
Product: Soluble lytic murein transglycosylase precursor
Products: 1,6-Anhydrobond [C]
Alternate protein names: Peptidoglycan lytic exotransglycosylase [H]
Number of amino acids: Translated: 653; Mature: 653
Protein sequence:
>653_residues MKIIIKLLTSILLLLALKVNANSDAVDNVKQVFTYIDQKNWSQAEDLALEVNNKILTKIVLSQKYLDNKYSDNSFEHVIR FLCNNPDWPQNKLLEEIAEEYLNNNTNKKVIVDWFSKHSPLTGKGYKFYAAAASSLIKDQKILLPIIKEAWVYANFTPEE ENAYYNKWHKYLTASDHLERIEEHLWKNDIRSAEQSLKYVEQGYRNSFKVQIAIIGKSPNAEKLFKSVPEKYYTSGLLYR YLDFKKMQKPTKEIITLFKKAKNNRKHFAKWCRIQSYYAREFIEYKDFANSYRMATLPFATCPETIREQEWLAGWLSLSF LKKPDQALVHFNKFIKVVKTPISLARGFYWLGRTYAAKGDKQMARKFYEQAAKYSFTFYGQVANIELNRTKLVLPSIPVI TSEERKIIENKEIIKAIRLLVKYNKNYLALIYSKAAMKNTKNSAEIQVIANIIKANNNTNHMVEVAKIAAQNNAFILDCA FPTPYNLVGLPIPPHLTYGIIRQESVFDHKAVSYANAMGLMQLIKGTACDTARSINVKCNVADLTRNPVYNIKLGAHHFK KLLDNHKGSYILSIASYNAGSHNVVKWIDRFGDPRDIKDTRKVIDWIELIPYRETRDYVQRVLENVQIYRVILNKNSSLY FKRDLHACDIAKS
Sequences:
>Translated_653_residues MKIIIKLLTSILLLLALKVNANSDAVDNVKQVFTYIDQKNWSQAEDLALEVNNKILTKIVLSQKYLDNKYSDNSFEHVIR FLCNNPDWPQNKLLEEIAEEYLNNNTNKKVIVDWFSKHSPLTGKGYKFYAAAASSLIKDQKILLPIIKEAWVYANFTPEE ENAYYNKWHKYLTASDHLERIEEHLWKNDIRSAEQSLKYVEQGYRNSFKVQIAIIGKSPNAEKLFKSVPEKYYTSGLLYR YLDFKKMQKPTKEIITLFKKAKNNRKHFAKWCRIQSYYAREFIEYKDFANSYRMATLPFATCPETIREQEWLAGWLSLSF LKKPDQALVHFNKFIKVVKTPISLARGFYWLGRTYAAKGDKQMARKFYEQAAKYSFTFYGQVANIELNRTKLVLPSIPVI TSEERKIIENKEIIKAIRLLVKYNKNYLALIYSKAAMKNTKNSAEIQVIANIIKANNNTNHMVEVAKIAAQNNAFILDCA FPTPYNLVGLPIPPHLTYGIIRQESVFDHKAVSYANAMGLMQLIKGTACDTARSINVKCNVADLTRNPVYNIKLGAHHFK KLLDNHKGSYILSIASYNAGSHNVVKWIDRFGDPRDIKDTRKVIDWIELIPYRETRDYVQRVLENVQIYRVILNKNSSLY FKRDLHACDIAKS >Mature_653_residues MKIIIKLLTSILLLLALKVNANSDAVDNVKQVFTYIDQKNWSQAEDLALEVNNKILTKIVLSQKYLDNKYSDNSFEHVIR FLCNNPDWPQNKLLEEIAEEYLNNNTNKKVIVDWFSKHSPLTGKGYKFYAAAASSLIKDQKILLPIIKEAWVYANFTPEE ENAYYNKWHKYLTASDHLERIEEHLWKNDIRSAEQSLKYVEQGYRNSFKVQIAIIGKSPNAEKLFKSVPEKYYTSGLLYR YLDFKKMQKPTKEIITLFKKAKNNRKHFAKWCRIQSYYAREFIEYKDFANSYRMATLPFATCPETIREQEWLAGWLSLSF LKKPDQALVHFNKFIKVVKTPISLARGFYWLGRTYAAKGDKQMARKFYEQAAKYSFTFYGQVANIELNRTKLVLPSIPVI TSEERKIIENKEIIKAIRLLVKYNKNYLALIYSKAAMKNTKNSAEIQVIANIIKANNNTNHMVEVAKIAAQNNAFILDCA FPTPYNLVGLPIPPHLTYGIIRQESVFDHKAVSYANAMGLMQLIKGTACDTARSINVKCNVADLTRNPVYNIKLGAHHFK KLLDNHKGSYILSIASYNAGSHNVVKWIDRFGDPRDIKDTRKVIDWIELIPYRETRDYVQRVLENVQIYRVILNKNSSLY FKRDLHACDIAKS
Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transglycosylase slt family [H]
Homologues:
Organism=Escherichia coli, GI87082441, Length=170, Percent_Identity=30, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016026 - InterPro: IPR008258 - InterPro: IPR012289 - InterPro: IPR008939 - InterPro: IPR000189 [H]
Pfam domain/function: PF01464 SLT [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 75787; Mature: 75787
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIIKLLTSILLLLALKVNANSDAVDNVKQVFTYIDQKNWSQAEDLALEVNNKILTKIV CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHH LSQKYLDNKYSDNSFEHVIRFLCNNPDWPQNKLLEEIAEEYLNNNTNKKVIVDWFSKHSP HHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCC LTGKGYKFYAAAASSLIKDQKILLPIIKEAWVYANFTPEEENAYYNKWHKYLTASDHLER CCCCCEEEHHHHHHHHHCCCHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHCHHHHHHH IEEHLWKNDIRSAEQSLKYVEQGYRNSFKVQIAIIGKSPNAEKLFKSVPEKYYTSGLLYR HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHH YLDFKKMQKPTKEIITLFKKAKNNRKHFAKWCRIQSYYAREFIEYKDFANSYRMATLPFA HHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC TCPETIREQEWLAGWLSLSFLKKPDQALVHFNKFIKVVKTPISLARGFYWLGRTYAAKGD CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH KQMARKFYEQAAKYSFTFYGQVANIELNRTKLVLPSIPVITSEERKIIENKEIIKAIRLL HHHHHHHHHHHHHCEEEEEEEEEEEEECCEEEEECCCCCEECCHHHHHHHHHHHHHHHHH VKYNKNYLALIYSKAAMKNTKNSAEIQVIANIIKANNNTNHMVEVAKIAAQNNAFILDCA HHHCCCEEEEEEEHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEC FPTPYNLVGLPIPPHLTYGIIRQESVFDHKAVSYANAMGLMQLIKGTACDTARSINVKCN CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE VADLTRNPVYNIKLGAHHFKKLLDNHKGSYILSIASYNAGSHNVVKWIDRFGDPRDIKDT EEECCCCCEEEEEECHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHH RKVIDWIELIPYRETRDYVQRVLENVQIYRVILNKNSSLYFKRDLHACDIAKS HHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCCHHCCCCC >Mature Secondary Structure MKIIIKLLTSILLLLALKVNANSDAVDNVKQVFTYIDQKNWSQAEDLALEVNNKILTKIV CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHH LSQKYLDNKYSDNSFEHVIRFLCNNPDWPQNKLLEEIAEEYLNNNTNKKVIVDWFSKHSP HHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCC LTGKGYKFYAAAASSLIKDQKILLPIIKEAWVYANFTPEEENAYYNKWHKYLTASDHLER CCCCCEEEHHHHHHHHHCCCHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHCHHHHHHH IEEHLWKNDIRSAEQSLKYVEQGYRNSFKVQIAIIGKSPNAEKLFKSVPEKYYTSGLLYR HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHH YLDFKKMQKPTKEIITLFKKAKNNRKHFAKWCRIQSYYAREFIEYKDFANSYRMATLPFA HHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC TCPETIREQEWLAGWLSLSFLKKPDQALVHFNKFIKVVKTPISLARGFYWLGRTYAAKGD CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH KQMARKFYEQAAKYSFTFYGQVANIELNRTKLVLPSIPVITSEERKIIENKEIIKAIRLL HHHHHHHHHHHHHCEEEEEEEEEEEEECCEEEEECCCCCEECCHHHHHHHHHHHHHHHHH VKYNKNYLALIYSKAAMKNTKNSAEIQVIANIIKANNNTNHMVEVAKIAAQNNAFILDCA HHHCCCEEEEEEEHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEC FPTPYNLVGLPIPPHLTYGIIRQESVFDHKAVSYANAMGLMQLIKGTACDTARSINVKCN CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE VADLTRNPVYNIKLGAHHFKKLLDNHKGSYILSIASYNAGSHNVVKWIDRFGDPRDIKDT EEECCCCCEEEEEECHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHH RKVIDWIELIPYRETRDYVQRVLENVQIYRVILNKNSSLYFKRDLHACDIAKS HHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]
General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]