| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is folE [H]
Identifier: 229586652
GI number: 229586652
Start: 518905
End: 519474
Strand: Direct
Name: folE [H]
Synonym: RAF_ORF0489
Alternate gene names: 229586652
Gene position: 518905-519474 (Clockwise)
Preceding gene: 229586651
Following gene: 229586653
Centisome position: 40.59
GC content: 35.09
Gene sequence:
>570_bases ATGAGTAAACCAACTAGAGAAGAAGCTACAGAGGCAGTAAGAACGTTACTAAAATTCATTGGTGAAGATCCAAGCAGAGA AGGGTTGCTTCAAACGCCTGATAGAGTAATTAATAGCTACGTAGAAATATTTTCCGGTTATGGAAAGGATGTAGCAGAAA TATTAAATACCAAGTTTTATGAAACTTGTAATTTTCAAGATTTTATCTTACTGAATATAAAATTTACCTCTTTCTGTGAA CATCATATATTACCTTTTAACGGTACAGTAGATATAGCTTATATTCCTGATAATTGTATTGTCGGCATAAGTAAGCTAGC ACGAATAGTAAATATTTTTGCTAGAAGACTACAAATCCAAGAAAAAATGACGGTACAGATAGCAGAAAGCGTGCAGGAGA ATTTAAAGCCGCTTGGCGTTGCCGTTAAGATTTCTGCCGTACATAGCTGTATGTCAATGCGTGGCGTAATGCAAGATAAT AGTGTTATGAATACCATGCATTATACGGGTATATTTGCCGAACAGCAGAAATATCGTCATGAGTTTTTAAACCTTACTGC TAAAAGGTGA
Upstream 100 bases:
>100_bases GGAATGATGGGCGGAGGAGGGGTTATTGCTATAGTAGGCGGCTTGATGTTTGTATATATTTGTGTTAAAGTAATATTTTT TAAAAGTATAAAACTAGCAC
Downstream 100 bases:
>100_bases TACGTTATTAATGTCATTTCTGCGGAAGTGGGAATCCAGTCATTTTGTCATACCGTGACTTGATTGCGGTATCCAGAAAA AAATTTAAAAAAACTGGATC
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSKPTREEATEAVRTLLKFIGEDPSREGLLQTPDRVINSYVEIFSGYGKDVAEILNTKFYETCNFQDFILLNIKFTSFCE HHILPFNGTVDIAYIPDNCIVGISKLARIVNIFARRLQIQEKMTVQIAESVQENLKPLGVAVKISAVHSCMSMRGVMQDN SVMNTMHYTGIFAEQQKYRHEFLNLTAKR
Sequences:
>Translated_189_residues MSKPTREEATEAVRTLLKFIGEDPSREGLLQTPDRVINSYVEIFSGYGKDVAEILNTKFYETCNFQDFILLNIKFTSFCE HHILPFNGTVDIAYIPDNCIVGISKLARIVNIFARRLQIQEKMTVQIAESVQENLKPLGVAVKISAVHSCMSMRGVMQDN SVMNTMHYTGIFAEQQKYRHEFLNLTAKR >Mature_188_residues SKPTREEATEAVRTLLKFIGEDPSREGLLQTPDRVINSYVEIFSGYGKDVAEILNTKFYETCNFQDFILLNIKFTSFCEH HILPFNGTVDIAYIPDNCIVGISKLARIVNIFARRLQIQEKMTVQIAESVQENLKPLGVAVKISAVHSCMSMRGVMQDNS VMNTMHYTGIFAEQQKYRHEFLNLTAKR
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=174, Percent_Identity=43.1034482758621, Blast_Score=157, Evalue=4e-39, Organism=Homo sapiens, GI4503949, Length=174, Percent_Identity=43.1034482758621, Blast_Score=157, Evalue=4e-39, Organism=Homo sapiens, GI66932970, Length=162, Percent_Identity=38.2716049382716, Blast_Score=124, Evalue=4e-29, Organism=Homo sapiens, GI66932972, Length=138, Percent_Identity=40.5797101449275, Blast_Score=123, Evalue=1e-28, Organism=Escherichia coli, GI1788476, Length=171, Percent_Identity=38.0116959064327, Blast_Score=110, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17560486, Length=178, Percent_Identity=43.2584269662921, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6321706, Length=179, Percent_Identity=41.340782122905, Blast_Score=144, Evalue=8e-36, Organism=Drosophila melanogaster, GI24656782, Length=186, Percent_Identity=43.5483870967742, Blast_Score=153, Evalue=5e-38, Organism=Drosophila melanogaster, GI24656791, Length=186, Percent_Identity=43.5483870967742, Blast_Score=152, Evalue=8e-38, Organism=Drosophila melanogaster, GI24656796, Length=186, Percent_Identity=43.5483870967742, Blast_Score=152, Evalue=9e-38,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 21571; Mature: 21440
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPTREEATEAVRTLLKFIGEDPSREGLLQTPDRVINSYVEIFSGYGKDVAEILNTKFY CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH ETCNFQDFILLNIKFTSFCEHHILPFNGTVDIAYIPDNCIVGISKLARIVNIFARRLQIQ HCCCCCEEEEEEEEHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH EKMTVQIAESVQENLKPLGVAVKISAVHSCMSMRGVMQDNSVMNTMHYTGIFAEQQKYRH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH EFLNLTAKR HHHHHHCCC >Mature Secondary Structure SKPTREEATEAVRTLLKFIGEDPSREGLLQTPDRVINSYVEIFSGYGKDVAEILNTKFY CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH ETCNFQDFILLNIKFTSFCEHHILPFNGTVDIAYIPDNCIVGISKLARIVNIFARRLQIQ HCCCCCEEEEEEEEHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH EKMTVQIAESVQENLKPLGVAVKISAVHSCMSMRGVMQDNSVMNTMHYTGIFAEQQKYRH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH EFLNLTAKR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA