Click here to switch to the map view.

The map label for this gene is 229586634

Identifier: 229586634

GI number: 229586634

Start: 493797

End: 494714

Strand: Direct

Name: 229586634

Synonym: RAF_ORF0466

Alternate gene names: NA

Gene position: 493797-494714 (Clockwise)

Preceding gene: 229586633

Following gene: 229586635

Centisome position: 38.62

GC content: 34.1

Gene sequence:

>918_bases
TTGTTAAACAAGATATTCTTACTAAAGAAAATTTATCCGTACTGCCTTTCGCGCGTAAAGAACTTGAAGAGTAGTAACAT
GAACATTTTAGTTACTGCTCTTGAGCAATCCTTAATAATGTTGCCGCTTATTTTAGGGATGTATATAAGTTATCGGATTC
TCAAAATTACCGATCTTACCGTAGACGGTACTTATGTACTTGGTGCGGCAGTGTTTGCCCGCAGCCTTTCATTTGGGTTA
TTTCCTGCATTAATATTTGCCGTAATAGCAGGCGGAATTATAGGCAGTATAGTTAGTGTTATGCAGAAGAATAACCGCAT
TAACGGGCTTATAGCCGGAATACTTGCAAGTTTTATGCTTTATTCGGTTAACTTACAAATTATGCAGCGTCCTAATATAT
CGGTTCTTGGTATGCCGACTCTATTATCTATATTAGATCTCGAAAATTGGTTAATACCTTTAGTAATAATCAATTGTCTT
ATTATATGTTCAGTTATAATTTTATTAAAAGGTAAGCTCGGTTTATTTCTTCGTGCTTTTGGTTTTAATAAAGATTTATT
GATTAATTTAGGAAAACCTGCTGAGCTTTACCGTACTATCGGTTTTAGCATAAGTAATTGTTTGGCTGCTTTAACCGGTA
CTTTATCTGCACAAGTAAATGGTTTTGCCGATATTAATATGGGTTTCGGGGTGGCACTAGTCGGTATTGGTGCAATTGTT
ATAGGGCGTCATATTTTAATCCATGCTAATAATTTTAATGCGTTTAAAGAGATATTGTCTTGTTTGATAGGTATATTATT
TTACTTTATTGCTCTGGGCTTTTTACTCCGAATTGGAATCGATCCCATAAATCTTAAGCTTATTTTAGGTATAGTATTGT
TTATTTCGTTGAGTTCTGTAAAAAGAGAGGCTTTATGA

Upstream 100 bases:

>100_bases
GCAGGTTTAATGGCAAAAAAAATCTTACAAGGAATAGAACCGAAAGATATTCCATTTGGGGATATGAAAGACTTAACTTT
ATTTATTAACCTTAAATCAT

Downstream 100 bases:

>100_bases
AACCTTATTTATATGCAGAAAATATACAGTTCAAAGTTAAAGAAAGAACCGAACCTATAATTGCTGAAACTACTTTAAAT
ATTACTAAAGAAGAGTTTGT

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MLNKIFLLKKIYPYCLSRVKNLKSSNMNILVTALEQSLIMLPLILGMYISYRILKITDLTVDGTYVLGAAVFARSLSFGL
FPALIFAVIAGGIIGSIVSVMQKNNRINGLIAGILASFMLYSVNLQIMQRPNISVLGMPTLLSILDLENWLIPLVIINCL
IICSVIILLKGKLGLFLRAFGFNKDLLINLGKPAELYRTIGFSISNCLAALTGTLSAQVNGFADINMGFGVALVGIGAIV
IGRHILIHANNFNAFKEILSCLIGILFYFIALGFLLRIGIDPINLKLILGIVLFISLSSVKREAL

Sequences:

>Translated_305_residues
MLNKIFLLKKIYPYCLSRVKNLKSSNMNILVTALEQSLIMLPLILGMYISYRILKITDLTVDGTYVLGAAVFARSLSFGL
FPALIFAVIAGGIIGSIVSVMQKNNRINGLIAGILASFMLYSVNLQIMQRPNISVLGMPTLLSILDLENWLIPLVIINCL
IICSVIILLKGKLGLFLRAFGFNKDLLINLGKPAELYRTIGFSISNCLAALTGTLSAQVNGFADINMGFGVALVGIGAIV
IGRHILIHANNFNAFKEILSCLIGILFYFIALGFLLRIGIDPINLKLILGIVLFISLSSVKREAL
>Mature_305_residues
MLNKIFLLKKIYPYCLSRVKNLKSSNMNILVTALEQSLIMLPLILGMYISYRILKITDLTVDGTYVLGAAVFARSLSFGL
FPALIFAVIAGGIIGSIVSVMQKNNRINGLIAGILASFMLYSVNLQIMQRPNISVLGMPTLLSILDLENWLIPLVIINCL
IICSVIILLKGKLGLFLRAFGFNKDLLINLGKPAELYRTIGFSISNCLAALTGTLSAQVNGFADINMGFGVALVGIGAIV
IGRHILIHANNFNAFKEILSCLIGILFYFIALGFLLRIGIDPINLKLILGIVLFISLSSVKREAL

Specific function: Unknown

COG id: COG4120

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 33236; Mature: 33236

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKIFLLKKIYPYCLSRVKNLKSSNMNILVTALEQSLIMLPLILGMYISYRILKITDLT
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
VDGTYVLGAAVFARSLSFGLFPALIFAVIAGGIIGSIVSVMQKNNRINGLIAGILASFML
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
YSVNLQIMQRPNISVLGMPTLLSILDLENWLIPLVIINCLIICSVIILLKGKLGLFLRAF
HHHHHHEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
GFNKDLLINLGKPAELYRTIGFSISNCLAALTGTLSAQVNGFADINMGFGVALVGIGAIV
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHH
IGRHILIHANNFNAFKEILSCLIGILFYFIALGFLLRIGIDPINLKLILGIVLFISLSSV
HCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KREAL
HHHCC
>Mature Secondary Structure
MLNKIFLLKKIYPYCLSRVKNLKSSNMNILVTALEQSLIMLPLILGMYISYRILKITDLT
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
VDGTYVLGAAVFARSLSFGLFPALIFAVIAGGIIGSIVSVMQKNNRINGLIAGILASFML
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
YSVNLQIMQRPNISVLGMPTLLSILDLENWLIPLVIINCLIICSVIILLKGKLGLFLRAF
HHHHHHEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
GFNKDLLINLGKPAELYRTIGFSISNCLAALTGTLSAQVNGFADINMGFGVALVGIGAIV
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHH
IGRHILIHANNFNAFKEILSCLIGILFYFIALGFLLRIGIDPINLKLILGIVLFISLSSV
HCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KREAL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]