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The map label for this gene is nlpD1 [C]

Identifier: 229586556

GI number: 229586556

Start: 404450

End: 405124

Strand: Direct

Name: nlpD1 [C]

Synonym: RAF_ORF0377

Alternate gene names: 229586556

Gene position: 404450-405124 (Clockwise)

Preceding gene: 229586553

Following gene: 229586557

Centisome position: 31.63

GC content: 31.11

Gene sequence:

>675_bases
TTGTTTTCTAATGTAAATAATAGTTTTGTTAAATATATGAAATATCCTGTTGTACTTAGTATCGTTATATGTTTTTGTTT
AGTTGCTTGTGTTGATCAGCCACCGGCTCCAATTGAGTATAAAGTAGGAGATGTTACTGCAAATAATAATTCTACCGCAC
TAGATTACGATGAGGGTATGATAGTTCAAAGAACTATGGAAGACAATCCCGCGTCAGAAAAAGTTAGCGGTAGACTCGAA
GAGCCAAAGGCAAAAATTATAGAAGATGATAATGATGATATTGAGATTCCTATGTCTCGGAATGAAGACGAAGATGAAGA
ATCGATAGAACAATTAAACTTTGTAAAACCGTTAAATGGGGTAATTATTACCGAGTTTAAAGCCGGTAAAAGTAAAGGGA
TAGATATTGTAGCTAAAGAATATAGTGAAGTTAAATCGATAGCTGCAGGAACGGTAATATATTCAGGTTATAATAAGCAA
TTCGGTAATTTAGTAATAGTTAAATTAGATAAAGACGATCTAGAAGTAGCATATGCGAGTTTAGATGATTTATTACTGAA
AAAAGGTGATAAAATTGCTAGAAATAGTGTTATCGGACATGTAGAACATAAATTATATTTTGCTATGCGTAAAAATAAAA
TAGCAGTTGATCCTAATAAGTATATAGAATTTTAA

Upstream 100 bases:

>100_bases
GCTCATAACCTGAATGATCACTAGCTATGACAATATTATAAGTTTTCATAGTTAATTTTTTGATGGAAAATAATGATAAA
AATTATATACTATGTAAGAT

Downstream 100 bases:

>100_bases
ATGGAAGATGTTATTACTCTTACCAAATATGGTGAACCTCAAAATGTTATAGTAAGAAGGAGTAGCAAAGCTAAAAATAT
AGCCATCCGCATTACGTCTA

Product: Membrane-bound metallopeptidase

Products: NA

Alternate protein names: Membrane-Bound Metallopeptidase

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MFSNVNNSFVKYMKYPVVLSIVICFCLVACVDQPPAPIEYKVGDVTANNNSTALDYDEGMIVQRTMEDNPASEKVSGRLE
EPKAKIIEDDNDDIEIPMSRNEDEDEESIEQLNFVKPLNGVIITEFKAGKSKGIDIVAKEYSEVKSIAAGTVIYSGYNKQ
FGNLVIVKLDKDDLEVAYASLDDLLLKKGDKIARNSVIGHVEHKLYFAMRKNKIAVDPNKYIEF

Sequences:

>Translated_224_residues
MFSNVNNSFVKYMKYPVVLSIVICFCLVACVDQPPAPIEYKVGDVTANNNSTALDYDEGMIVQRTMEDNPASEKVSGRLE
EPKAKIIEDDNDDIEIPMSRNEDEDEESIEQLNFVKPLNGVIITEFKAGKSKGIDIVAKEYSEVKSIAAGTVIYSGYNKQ
FGNLVIVKLDKDDLEVAYASLDDLLLKKGDKIARNSVIGHVEHKLYFAMRKNKIAVDPNKYIEF
>Mature_224_residues
MFSNVNNSFVKYMKYPVVLSIVICFCLVACVDQPPAPIEYKVGDVTANNNSTALDYDEGMIVQRTMEDNPASEKVSGRLE
EPKAKIIEDDNDDIEIPMSRNEDEDEESIEQLNFVKPLNGVIITEFKAGKSKGIDIVAKEYSEVKSIAAGTVIYSGYNKQ
FGNLVIVKLDKDDLEVAYASLDDLLLKKGDKIARNSVIGHVEHKLYFAMRKNKIAVDPNKYIEF

Specific function: May Be Involved In Stationary-Phase Survival. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Attached To The Inner Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25098; Mature: 25098

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSNVNNSFVKYMKYPVVLSIVICFCLVACVDQPPAPIEYKVGDVTANNNSTALDYDEGM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECEEEECCCCEEEECCCCE
IVQRTMEDNPASEKVSGRLEEPKAKIIEDDNDDIEIPMSRNEDEDEESIEQLNFVKPLNG
EEEEECCCCCCCHHHCCCCCCCCHHEECCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCC
VIITEFKAGKSKGIDIVAKEYSEVKSIAAGTVIYSGYNKQFGNLVIVKLDKDDLEVAYAS
EEEEEECCCCCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEEECCCCHHHHHHH
LDDLLLKKGDKIARNSVIGHVEHKLYFAMRKNKIAVDPNKYIEF
HHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCEEEECCHHHCCC
>Mature Secondary Structure
MFSNVNNSFVKYMKYPVVLSIVICFCLVACVDQPPAPIEYKVGDVTANNNSTALDYDEGM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECEEEECCCCEEEECCCCE
IVQRTMEDNPASEKVSGRLEEPKAKIIEDDNDDIEIPMSRNEDEDEESIEQLNFVKPLNG
EEEEECCCCCCCHHHCCCCCCCCHHEECCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCC
VIITEFKAGKSKGIDIVAKEYSEVKSIAAGTVIYSGYNKQFGNLVIVKLDKDDLEVAYAS
EEEEEECCCCCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEEECCCCHHHHHHH
LDDLLLKKGDKIARNSVIGHVEHKLYFAMRKNKIAVDPNKYIEF
HHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCEEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA