| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is cysQ [H]
Identifier: 229586553
GI number: 229586553
Start: 400203
End: 400979
Strand: Direct
Name: cysQ [H]
Synonym: RAF_ORF0374
Alternate gene names: 229586553
Gene position: 400203-400979 (Clockwise)
Preceding gene: 229586552
Following gene: 229586556
Centisome position: 31.3
GC content: 33.72
Gene sequence:
>777_bases ATGAATGACAATTTAATTAATGCTTTAAAAGATTTAATTATTAATACCGGCAAGATTGCACTAGATATAAAAAAGGCAGG AATGTTGATTGATATTAAATCAGATGGGTCAGTAGTCACTAATGCCGATAAAGAAATTAGTAAAATAATTTATCAAACTC TACAAACCTTAACCTCTCAAATAGCTATAGTATGTGAAGAGCAGCCGCTACCTATATTCAGCAGTGATACTTTTTGGTTA ATCGATCCTATTGATGGGACATGGAGCTATGTAAACGGTAAAAGTACATATACGGTCAATATAGGGCTTATTGAAAACGG TTTGCCAACCATCGGCTTGATATATCACCCTGAAACAGCAAAGCTATATTATACTGATGTAAACGGTCGGTTAAAAATCG AACAGAATTCTAAAGAAATATTTGTTAATCATGAACTGAAACATGAAGAGCTTAATGCGGTAATAGGTTTTTATAATTCA AATAAAGCTACTAAAGAATTTTTAAGTAAGTATTCATTCGGTCAAATAAATGCAATAGGCAGTTCAATGAAACTATGCTT AATTGCTGAAGGAGCAGCTGATATATATCCAAAATTCGGTCAAACTATGGAATGGGACATAGCGGCAGGTCATGCTTTAA TTAAAGCCGGTGGTGGTAATATTTTAGATACGCATGGACAAGAAATTACTTACGGTAAAGAAAGTTTTGCTAATCCTAAT TTTTTCGCCTGTAGTAAATATTGGTTGGAACGGGAGGCAAGGTTGCATAGATACTAG
Upstream 100 bases:
>100_bases CACCTGATCATCAAATCGCTGAGTTGCAGCAATCTACGTTTTTAAATACCGGTCAGTGGTTAGAAGATGATACAGCTGCA AAGATGTTAAATAAATAATT
Downstream 100 bases:
>100_bases ATCGTCATTGCAAGCAGCAGTAGGCTGCGTGGCAATCTCATGAAATAATCACAAACTCCTGAGATTGCTTTATCAAAACT TGCAGTTTTTCCTCGCAATG
Product: 3(2),5-bisphosphate nucleotidase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MNDNLINALKDLIINTGKIALDIKKAGMLIDIKSDGSVVTNADKEISKIIYQTLQTLTSQIAIVCEEQPLPIFSSDTFWL IDPIDGTWSYVNGKSTYTVNIGLIENGLPTIGLIYHPETAKLYYTDVNGRLKIEQNSKEIFVNHELKHEELNAVIGFYNS NKATKEFLSKYSFGQINAIGSSMKLCLIAEGAADIYPKFGQTMEWDIAAGHALIKAGGGNILDTHGQEITYGKESFANPN FFACSKYWLEREARLHRY
Sequences:
>Translated_258_residues MNDNLINALKDLIINTGKIALDIKKAGMLIDIKSDGSVVTNADKEISKIIYQTLQTLTSQIAIVCEEQPLPIFSSDTFWL IDPIDGTWSYVNGKSTYTVNIGLIENGLPTIGLIYHPETAKLYYTDVNGRLKIEQNSKEIFVNHELKHEELNAVIGFYNS NKATKEFLSKYSFGQINAIGSSMKLCLIAEGAADIYPKFGQTMEWDIAAGHALIKAGGGNILDTHGQEITYGKESFANPN FFACSKYWLEREARLHRY >Mature_258_residues MNDNLINALKDLIINTGKIALDIKKAGMLIDIKSDGSVVTNADKEISKIIYQTLQTLTSQIAIVCEEQPLPIFSSDTFWL IDPIDGTWSYVNGKSTYTVNIGLIENGLPTIGLIYHPETAKLYYTDVNGRLKIEQNSKEIFVNHELKHEELNAVIGFYNS NKATKEFLSKYSFGQINAIGSSMKLCLIAEGAADIYPKFGQTMEWDIAAGHALIKAGGGNILDTHGQEITYGKESFANPN FFACSKYWLEREARLHRY
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=207, Percent_Identity=30.4347826086957, Blast_Score=79, Evalue=4e-15, Organism=Escherichia coli, GI1790659, Length=247, Percent_Identity=33.6032388663968, Blast_Score=122, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6320493, Length=208, Percent_Identity=27.4038461538462, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6321836, Length=230, Percent_Identity=24.7826086956522, Blast_Score=66, Evalue=6e-12, Organism=Drosophila melanogaster, GI21357303, Length=168, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357329, Length=210, Percent_Identity=24.7619047619048, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24664926, Length=202, Percent_Identity=27.2277227722772, Blast_Score=68, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 28781; Mature: 28781
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDNLINALKDLIINTGKIALDIKKAGMLIDIKSDGSVVTNADKEISKIIYQTLQTLTSQ CCCHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHH IAIVCEEQPLPIFSSDTFWLIDPIDGTWSYVNGKSTYTVNIGLIENGLPTIGLIYHPETA EEEEECCCCCCEECCCCEEEEECCCCCEEEECCCEEEEEEEEEEECCCCEEEEEECCCCC KLYYTDVNGRLKIEQNSKEIFVNHELKHEELNAVIGFYNSNKATKEFLSKYSFGQINAIG EEEEEECCCEEEEECCCCEEEEECCCCHHHHEEEEEEECCCHHHHHHHHHCCCCEEEECC SSMKLCLIAEGAADIYPKFGQTMEWDIAAGHALIKAGGGNILDTHGQEITYGKESFANPN CCEEEEEEECCCHHHCCCCCCCEEEEEECCEEEEEECCCCEEECCCCEEEECHHHCCCCC FFACSKYWLEREARLHRY EEEHHHHHHHHHHHHCCC >Mature Secondary Structure MNDNLINALKDLIINTGKIALDIKKAGMLIDIKSDGSVVTNADKEISKIIYQTLQTLTSQ CCCHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHH IAIVCEEQPLPIFSSDTFWLIDPIDGTWSYVNGKSTYTVNIGLIENGLPTIGLIYHPETA EEEEECCCCCCEECCCCEEEEECCCCCEEEECCCEEEEEEEEEEECCCCEEEEEECCCCC KLYYTDVNGRLKIEQNSKEIFVNHELKHEELNAVIGFYNSNKATKEFLSKYSFGQINAIG EEEEEECCCEEEEECCCCEEEEECCCCHHHHEEEEEEECCCHHHHHHHHHCCCCEEEECC SSMKLCLIAEGAADIYPKFGQTMEWDIAAGHALIKAGGGNILDTHGQEITYGKESFANPN CCEEEEEEECCCHHHCCCCCCCEEEEEECCEEEEEECCCCEEECCCCEEEECHHHCCCCC FFACSKYWLEREARLHRY EEEHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]