| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is 229586470
Identifier: 229586470
GI number: 229586470
Start: 308239
End: 308385
Strand: Direct
Name: 229586470
Synonym: RAF_ORF0282
Alternate gene names: NA
Gene position: 308239-308385 (Clockwise)
Preceding gene: 229586468
Following gene: 229586472
Centisome position: 24.11
GC content: 34.69
Gene sequence:
>147_bases TTGTGTGTTTTAGAAAGTATAGTAACCACTGCTTTACCTATATTAACTAAGTTAGCTATATCAGGAGTGAGCTTTGCAAT TGCTAAGACCGGAGGCGGTAATAAGTTAGTTTTTATTGTGAGACTTATAACATTTCCGAGTTCTTGA
Upstream 100 bases:
>100_bases TTAAAAATATTAATAATAATGCTAATAAGCAACCTATGGCAATTAAAATATGAGTATTAGAATTAGACATTATTTTGCTC TTCCTTGTTGTTGAGTTAAG
Downstream 100 bases:
>100_bases CTTCCTGGTATGACTCCTACTATTTTTTTATGTTGCTTGCAATTTTCGTAGCTTTTTCTGCTGCTTTACATAAGGATTCT ATCTTTTCGCTACAAGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 48
Protein sequence:
>48_residues MCVLESIVTTALPILTKLAISGVSFAIAKTGGGNKLVFIVRLITFPSS
Sequences:
>Translated_48_residues MCVLESIVTTALPILTKLAISGVSFAIAKTGGGNKLVFIVRLITFPSS >Mature_48_residues MCVLESIVTTALPILTKLAISGVSFAIAKTGGGNKLVFIVRLITFPSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4979; Mature: 4979
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCVLESIVTTALPILTKLAISGVSFAIAKTGGGNKLVFIVRLITFPSS CCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCCCC >Mature Secondary Structure MCVLESIVTTALPILTKLAISGVSFAIAKTGGGNKLVFIVRLITFPSS CCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA