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The map label for this gene is lgtF

Identifier: 229586464

GI number: 229586464

Start: 297667

End: 298515

Strand: Direct

Name: lgtF

Synonym: RAF_ORF0272

Alternate gene names: NA

Gene position: 297667-298515 (Clockwise)

Preceding gene: 229586463

Following gene: 229586465

Centisome position: 23.28

GC content: 32.16

Gene sequence:

>849_bases
ATGAATAAGTCATTAACTGAAAAAATCTCAGCATTTATTATTACCAAAAATGAATCCACAAGGGTAGCACGAGCTATAAA
TAGCGTAAAAAATATTACTGATGAGGTGATAGTAGTCGATAGTGAAAGTACTGATGATACGGTAGCAATAGCTGAAAAAT
TAGGAGCAAAGGTAGTAATAAAACCGTGGCTTGGTTATGTAGGACAGAAATCTTTTGCCGAAAGCCTTTGCGTAAATGAT
TGGGTTCTTAATATTGATGCCGATGAGGAGTTGTCTAAAGAGTTACAAGACGAAATAGAGTATATTTTTGCCTCTCATAA
TCAAGATCGTTATTTAGCTTATCAAATAAAGCTGTTAATAATGCATCGTAATGATCAAAAGCCACGAATGTTTGCTCCAT
TTAATAAATGTACTCGGTTGTATAATAAAAAATTTGCAAGCTTTGCAAATACCGTAAATAGTACTACTCATGATTCGGTA
ATATTTAATAAAGATGTTGATTTTGCAGGTAAAATTTATCTATTAAATGAAGCTGCTTATCATTATTCTGGTACTTCAAT
TGAGCAGTTGGTCACTAAAGCAAATTTTTATTCTAACGAGCAAGCAAAAGATTTAGTTAAGCAAGGAAAAAAGCTTTCAA
ATTTTCGTTTAACAACAGAAATGATATGGTGGTTTTTTAAAGCGTTTTTTATCAGACGCTATTTTGTATTTGGTTTTGAC
GGTTTTGTAGATTCAATAATTTTTGCTTTTGCAAGATTTCTAAGGCTTACGAAGTTAAGAGAGTCATCGCTTAAATCAAA
AAACGTCATTGCGAACGACTATAAGGAGCGTGGCAATTTCATGAAGTAA

Upstream 100 bases:

>100_bases
AGCGGTTGCTATTCAAGAAGAATTAATATTCAACATAGGTTGGTTTATGAAGTTTATAAACAAGAAAAAGTTGTAAAAAT
TCTTAGAATGTATACGTATT

Downstream 100 bases:

>100_bases
TATAAAATTCCTGAGATTGCCACGTCGATGCTATGCATTTCCGCGCAATGACGATTTAGAAAATAAAAGATAAATTATGG
AAAATTTTAATGTTAGTAAA

Product: Beta 1,4 glucosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MNKSLTEKISAFIITKNESTRVARAINSVKNITDEVIVVDSESTDDTVAIAEKLGAKVVIKPWLGYVGQKSFAESLCVND
WVLNIDADEELSKELQDEIEYIFASHNQDRYLAYQIKLLIMHRNDQKPRMFAPFNKCTRLYNKKFASFANTVNSTTHDSV
IFNKDVDFAGKIYLLNEAAYHYSGTSIEQLVTKANFYSNEQAKDLVKQGKKLSNFRLTTEMIWWFFKAFFIRRYFVFGFD
GFVDSIIFAFARFLRLTKLRESSLKSKNVIANDYKERGNFMK

Sequences:

>Translated_282_residues
MNKSLTEKISAFIITKNESTRVARAINSVKNITDEVIVVDSESTDDTVAIAEKLGAKVVIKPWLGYVGQKSFAESLCVND
WVLNIDADEELSKELQDEIEYIFASHNQDRYLAYQIKLLIMHRNDQKPRMFAPFNKCTRLYNKKFASFANTVNSTTHDSV
IFNKDVDFAGKIYLLNEAAYHYSGTSIEQLVTKANFYSNEQAKDLVKQGKKLSNFRLTTEMIWWFFKAFFIRRYFVFGFD
GFVDSIIFAFARFLRLTKLRESSLKSKNVIANDYKERGNFMK
>Mature_282_residues
MNKSLTEKISAFIITKNESTRVARAINSVKNITDEVIVVDSESTDDTVAIAEKLGAKVVIKPWLGYVGQKSFAESLCVND
WVLNIDADEELSKELQDEIEYIFASHNQDRYLAYQIKLLIMHRNDQKPRMFAPFNKCTRLYNKKFASFANTVNSTTHDSV
IFNKDVDFAGKIYLLNEAAYHYSGTSIEQLVTKANFYSNEQAKDLVKQGKKLSNFRLTTEMIWWFFKAFFIRRYFVFGFD
GFVDSIIFAFARFLRLTKLRESSLKSKNVIANDYKERGNFMK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 32654; Mature: 32654

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSLTEKISAFIITKNESTRVARAINSVKNITDEVIVVDSESTDDTVAIAEKLGAKVVI
CCCHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCEEEE
KPWLGYVGQKSFAESLCVNDWVLNIDADEELSKELQDEIEYIFASHNQDRYLAYQIKLLI
EHHHHHHCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE
MHRNDQKPRMFAPFNKCTRLYNKKFASFANTVNSTTHDSVIFNKDVDFAGKIYLLNEAAY
EECCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEECCHH
HYSGTSIEQLVTKANFYSNEQAKDLVKQGKKLSNFRLTTEMIWWFFKAFFIRRYFVFGFD
CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFVDSIIFAFARFLRLTKLRESSLKSKNVIANDYKERGNFMK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MNKSLTEKISAFIITKNESTRVARAINSVKNITDEVIVVDSESTDDTVAIAEKLGAKVVI
CCCHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCEEEE
KPWLGYVGQKSFAESLCVNDWVLNIDADEELSKELQDEIEYIFASHNQDRYLAYQIKLLI
EHHHHHHCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE
MHRNDQKPRMFAPFNKCTRLYNKKFASFANTVNSTTHDSVIFNKDVDFAGKIYLLNEAAY
EECCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEECCHH
HYSGTSIEQLVTKANFYSNEQAKDLVKQGKKLSNFRLTTEMIWWFFKAFFIRRYFVFGFD
CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFVDSIIFAFARFLRLTKLRESSLKSKNVIANDYKERGNFMK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]