| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is 229586463
Identifier: 229586463
GI number: 229586463
Start: 297414
End: 297674
Strand: Direct
Name: 229586463
Synonym: RAF_ORF0271
Alternate gene names: NA
Gene position: 297414-297674 (Clockwise)
Preceding gene: 229586462
Following gene: 229586464
Centisome position: 23.26
GC content: 28.35
Gene sequence:
>261_bases ATGTATATAATTCGTTATACTATACAAGCACAAAAAGATGCTAAGAAAATAGTGCAAGCCGGTTTAAAGAATAAAGTAGA AGTTTTATTAAACATAGTTAGTACTGATCCTTGGAAAATTTACCCTCCATATGAAAAGCTCGTTGGTGACTTTAGCGGTT GCTATTCAAGAAGAATTAATATTCAACATAGGTTGGTTTATGAAGTTTATAAACAAGAAAAAGTTGTAAAAATTCTTAGA ATGTATACGTATTATGAATAA
Upstream 100 bases:
>100_bases TATTTATTATCTATTCCAAATATGCATAAGTTTATAATTGAAGGACGAGCAGAGCCTATAGCAAAGTGTAGCGATAAATT AAATTGGTAATTTTTTATAA
Downstream 100 bases:
>100_bases GTCATTAACTGAAAAAATCTCAGCATTTATTATTACCAAAAATGAATCCACAAGGGTAGCACGAGCTATAAATAGCGTAA AAAATATTACTGATGAGGTG
Product: Putative toxin of toxin-antitoxin (TA) system
Products: NA
Alternate protein names: Addiction Module Antitoxin; Txe/YoeB Family Addiction Module xin; Xin Of Toxin-Antitoxin System; Addiction Module xin Txe/YoeB; Cytoplasmic Protein
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MYIIRYTIQAQKDAKKIVQAGLKNKVEVLLNIVSTDPWKIYPPYEKLVGDFSGCYSRRINIQHRLVYEVYKQEKVVKILR MYTYYE
Sequences:
>Translated_86_residues MYIIRYTIQAQKDAKKIVQAGLKNKVEVLLNIVSTDPWKIYPPYEKLVGDFSGCYSRRINIQHRLVYEVYKQEKVVKILR MYTYYE >Mature_86_residues MYIIRYTIQAQKDAKKIVQAGLKNKVEVLLNIVSTDPWKIYPPYEKLVGDFSGCYSRRINIQHRLVYEVYKQEKVVKILR MYTYYE
Specific function: Unknown
COG id: COG4115
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10352; Mature: 10352
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIIRYTIQAQKDAKKIVQAGLKNKVEVLLNIVSTDPWKIYPPYEKLVGDFSGCYSRRIN CEEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCC IQHRLVYEVYKQEKVVKILRMYTYYE HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYIIRYTIQAQKDAKKIVQAGLKNKVEVLLNIVSTDPWKIYPPYEKLVGDFSGCYSRRIN CEEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCC IQHRLVYEVYKQEKVVKILRMYTYYE HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA