| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is 229586453
Identifier: 229586453
GI number: 229586453
Start: 283495
End: 283911
Strand: Direct
Name: 229586453
Synonym: RAF_ORF0259
Alternate gene names: NA
Gene position: 283495-283911 (Clockwise)
Preceding gene: 229586452
Following gene: 229586456
Centisome position: 22.17
GC content: 30.46
Gene sequence:
>417_bases GTGAAAAAAACTCCACATGGTAAAACATCTCAATATGAAATTAGCGGCTTTATTAACAAAGCCGGCGCACATATAAACGA TCCAAAGCAAATAAAAGAAATTTCAAAATTATACGCTCATGCCGTATTTGCTGATTTACAGAAAAATATTTTAGGTAAAT TTGATAAGAACGGTAATTTAAGTATAACTAAAGATTTTGCAATTGATGAAAATCCAGTCTTTAGAAAAGACGGTAAATTA TTATGGGTTAAAACTCAAAGCAGTTTGATAAATAGAGAAGGAGAAATGACAGCAGTAAATCATATTTTACGAAAAGGCAG ATTTTTGTTTGAAGATTTAGGCGGTAAGGTAGATACAAAATTAGGGACCACAAATCTAAACAAAAAGCTGACAAAGCCTA TTTTAAAAAGAGGTTAA
Upstream 100 bases:
>100_bases CTTAAAGTTTGAAAAGAATAGTGATATTTATTCTTTAAAAAGGAAAGTAATTAATATAGTAGAGGATCAAACTAAGCTAC TTACGGAAACTCAATTTCTT
Downstream 100 bases:
>100_bases AATAACTTTAAGCCCTCTCATAAGAAATAAAATTAAAATTATTTGAAATTAGTGTTTGACAAGCTTTAAAAATATAGATA TAAAACTATCACACAAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MKKTPHGKTSQYEISGFINKAGAHINDPKQIKEISKLYAHAVFADLQKNILGKFDKNGNLSITKDFAIDENPVFRKDGKL LWVKTQSSLINREGEMTAVNHILRKGRFLFEDLGGKVDTKLGTTNLNKKLTKPILKRG
Sequences:
>Translated_138_residues MKKTPHGKTSQYEISGFINKAGAHINDPKQIKEISKLYAHAVFADLQKNILGKFDKNGNLSITKDFAIDENPVFRKDGKL LWVKTQSSLINREGEMTAVNHILRKGRFLFEDLGGKVDTKLGTTNLNKKLTKPILKRG >Mature_138_residues MKKTPHGKTSQYEISGFINKAGAHINDPKQIKEISKLYAHAVFADLQKNILGKFDKNGNLSITKDFAIDENPVFRKDGKL LWVKTQSSLINREGEMTAVNHILRKGRFLFEDLGGKVDTKLGTTNLNKKLTKPILKRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15521; Mature: 15521
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTPHGKTSQYEISGFINKAGAHINDPKQIKEISKLYAHAVFADLQKNILGKFDKNGNL CCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE SITKDFAIDENPVFRKDGKLLWVKTQSSLINREGEMTAVNHILRKGRFLFEDLGGKVDTK EEEECCCCCCCCCEECCCCEEEEECHHHHHCCCCCHHHHHHHHHHCHHHHHHCCCCCCCC LGTTNLNKKLTKPILKRG CCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKKTPHGKTSQYEISGFINKAGAHINDPKQIKEISKLYAHAVFADLQKNILGKFDKNGNL CCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE SITKDFAIDENPVFRKDGKLLWVKTQSSLINREGEMTAVNHILRKGRFLFEDLGGKVDTK EEEECCCCCCCCCEECCCCEEEEECHHHHHCCCCCHHHHHHHHHHCHHHHHHCCCCCCCC LGTTNLNKKLTKPILKRG CCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA