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The map label for this gene is virB2

Identifier: 229586436

GI number: 229586436

Start: 253513

End: 253869

Strand: Direct

Name: virB2

Synonym: RAF_ORF0232

Alternate gene names: NA

Gene position: 253513-253869 (Clockwise)

Preceding gene: 229586435

Following gene: 229586438

Centisome position: 19.83

GC content: 32.21

Gene sequence:

>357_bases
ATGAACTTTCCTATTCGTAAATTAAACGAAGAATTAATCGATTATAATCTATCATTACGCATATTATTTACTATTCTAAG
CATGGCTATTATTATGGTAGCTTTTGATAGCTTAGGTAGTAATGGCGATCCTGTAGGTGACGCATTATGTAAGTTAATTA
AAGTATTCAGAGGCAATACTGCAAAAGGTATAGCTGTTGTCGGTATAATTGTTCTGGGAATTCAAACATTAAGAGGAAAA
TTGCAGTGGGAAGTAGCTTTAGTGGTAGTTACTGCAATCATTATATTATTTAAAGCTCCAGATATTGTTAATATGGTATC
AAGTGATACTAATAGCTCAAGTTGTGGTGTTTCCTAA

Upstream 100 bases:

>100_bases
TGCATATTCATTAAAATTGCATATATTTAGGAGTTGATTTATATATAAATAAATTATACATTATTTTTTAAATGCTAATT
ATTTTATTGAGGTAAAACAT

Downstream 100 bases:

>100_bases
TACACAAAAAAATTATTATATCTTTAGTAATATCCATAAGCTTCGGCTTATGGGTATTTTTATTTTTAAGTGATGTTGTT
GCATAGCCCCTATGTCATTC

Product: VirB2-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MNFPIRKLNEELIDYNLSLRILFTILSMAIIMVAFDSLGSNGDPVGDALCKLIKVFRGNTAKGIAVVGIIVLGIQTLRGK
LQWEVALVVVTAIIILFKAPDIVNMVSSDTNSSSCGVS

Sequences:

>Translated_118_residues
MNFPIRKLNEELIDYNLSLRILFTILSMAIIMVAFDSLGSNGDPVGDALCKLIKVFRGNTAKGIAVVGIIVLGIQTLRGK
LQWEVALVVVTAIIILFKAPDIVNMVSSDTNSSSCGVS
>Mature_118_residues
MNFPIRKLNEELIDYNLSLRILFTILSMAIIMVAFDSLGSNGDPVGDALCKLIKVFRGNTAKGIAVVGIIVLGIQTLRGK
LQWEVALVVVTAIIILFKAPDIVNMVSSDTNSSSCGVS

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007039 [H]

Pfam domain/function: PF04956 TrbC [H]

EC number: NA

Molecular weight: Translated: 12681; Mature: 12681

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFPIRKLNEELIDYNLSLRILFTILSMAIIMVAFDSLGSNGDPVGDALCKLIKVFRGNT
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
AKGIAVVGIIVLGIQTLRGKLQWEVALVVVTAIIILFKAPDIVNMVSSDTNSSSCGVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNFPIRKLNEELIDYNLSLRILFTILSMAIIMVAFDSLGSNGDPVGDALCKLIKVFRGNT
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
AKGIAVVGIIVLGIQTLRGKLQWEVALVVVTAIIILFKAPDIVNMVSSDTNSSSCGVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]