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The map label for this gene is secE

Identifier: 229586373

GI number: 229586373

Start: 175628

End: 175828

Strand: Direct

Name: secE

Synonym: RAF_ORF0164

Alternate gene names: 229586373

Gene position: 175628-175828 (Clockwise)

Preceding gene: 229586372

Following gene: 229586374

Centisome position: 13.74

GC content: 28.36

Gene sequence:

>201_bases
ATGTTTAAAGAATATAAAATTTATAAGTTTTTTGAGCAAGTTAAACAAGAAACTTATAAGGTAGTTTGGCCAACTAGAAA
AGAGCTTGTTGCTTCAACATTAGTAGTGGTAGTAGCAGTTTTTATTTTTAGCCTAATTTGTTTGGTACTTGATTATAGTA
TACATAACATAATGCAGCTTTTGCTTAATATCGGCAAATAG

Upstream 100 bases:

>100_bases
GTACATACTAGTATGTGAGAATTCCAGTACTGGATTATCGTCTCAATTGCCTCTAGAAGTAGCATTTTGTAAGAAGTCTA
ATAAATGACCTAACAAAAAT

Downstream 100 bases:

>100_bases
TATAAGGAATAAATTGTGACAGCACAGAGTATAGATAATATATTGCCTTCTTCTGAAAAAAATGTAAAGCAGTGGTATGT
AGTGCATACGGCATCAGGAG

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MFKEYKIYKFFEQVKQETYKVVWPTRKELVASTLVVVVAVFIFSLICLVLDYSIHNIMQLLLNIGK

Sequences:

>Translated_66_residues
MFKEYKIYKFFEQVKQETYKVVWPTRKELVASTLVVVVAVFIFSLICLVLDYSIHNIMQLLLNIGK
>Mature_66_residues
MFKEYKIYKFFEQVKQETYKVVWPTRKELVASTLVVVVAVFIFSLICLVLDYSIHNIMQLLLNIGK

Specific function: Essential for protein export

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECE_RICCN (Q92J92)

Other databases:

- EMBL:   AE006914
- PIR:   G97721
- RefSeq:   NP_359812.1
- GeneID:   928012
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC0175
- OMA:   KNMFKEY
- ProtClustDB:   PRK07597
- BioCyc:   RCON272944:RC0175-MONOMER
- InterPro:   IPR001901
- InterPro:   IPR005807
- TIGRFAMs:   TIGR00964

Pfam domain/function: PF00584 SecE

EC number: NA

Molecular weight: Translated: 7830; Mature: 7830

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x2007260c)-;

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKEYKIYKFFEQVKQETYKVVWPTRKELVASTLVVVVAVFIFSLICLVLDYSIHNIMQL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLNIGK
HHHCCH
>Mature Secondary Structure
MFKEYKIYKFFEQVKQETYKVVWPTRKELVASTLVVVVAVFIFSLICLVLDYSIHNIMQL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLNIGK
HHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893