Click here to switch to the map view.

The map label for this gene is nusG [H]

Identifier: 229586374

GI number: 229586374

Start: 175844

End: 176422

Strand: Direct

Name: nusG [H]

Synonym: RAF_ORF0165

Alternate gene names: 229586374

Gene position: 175844-176422 (Clockwise)

Preceding gene: 229586373

Following gene: 229586375

Centisome position: 13.75

GC content: 31.61

Gene sequence:

>579_bases
GTGACAGCACAGAGTATAGATAATATATTGCCTTCTTCTGAAAAAAATGTAAAGCAGTGGTATGTAGTGCATACGGCATC
AGGAGCAGAGAAACGCATTAAAGAAGATATGCTTAGAAAAATCGCTAAACAGAACATGACGGGTTTTTTTGAAGATATAT
TAATACCTGTTTTTGGAGTTTCTGAAGTTAAACGCGGTAAAAATGTCAAGGTAGAAAAAAAACTAATGCCGAGTTATATC
TTGATAAAGATGAATATGACTGATAAATCTTGGCATTTAGTAAAAAATATATCTGGAGTAACCGGCTTTTTAGGAAGCAA
AACCACGCCAAAAGCTCTTACAGAAAGTGAAATACAAAATATTTTTAATAATTTGGAAGCAGAAGCTAAAGAAGCAAAGA
ATTCTAAATTGTATGAAGTTGGTGAAATAGTGACTGTTACAGACGGTCCTTTTGAAACTTTCATGGGTACAGTAGAAGAA
ATAGATCAAGAAAAAAATAGGTTAAAAGTTTCAGTTGCAATATTTGGTAAAGCAACTCCAATAGAACTAAATTTTAATCA
AGTAAAGAAAAATGATTAA

Upstream 100 bases:

>100_bases
AGTTTTTATTTTTAGCCTAATTTGTTTGGTACTTGATTATAGTATACATAACATAATGCAGCTTTTGCTTAATATCGGCA
AATAGTATAAGGAATAAATT

Downstream 100 bases:

>100_bases
AAGTTGGACTAAATACGGTTTATTAATTACTTAAGCTGTATTGTACTAATGTTCAGGATGTCATTGTTGCGGGATAATGC
GTCGTCATTGCAAGCAGCCG

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTAQSIDNILPSSEKNVKQWYVVHTASGAEKRIKEDMLRKIAKQNMTGFFEDILIPVFGVSEVKRGKNVKVEKKLMPSYI
LIKMNMTDKSWHLVKNISGVTGFLGSKTTPKALTESEIQNIFNNLEAEAKEAKNSKLYEVGEIVTVTDGPFETFMGTVEE
IDQEKNRLKVSVAIFGKATPIELNFNQVKKND

Sequences:

>Translated_192_residues
MTAQSIDNILPSSEKNVKQWYVVHTASGAEKRIKEDMLRKIAKQNMTGFFEDILIPVFGVSEVKRGKNVKVEKKLMPSYI
LIKMNMTDKSWHLVKNISGVTGFLGSKTTPKALTESEIQNIFNNLEAEAKEAKNSKLYEVGEIVTVTDGPFETFMGTVEE
IDQEKNRLKVSVAIFGKATPIELNFNQVKKND
>Mature_191_residues
TAQSIDNILPSSEKNVKQWYVVHTASGAEKRIKEDMLRKIAKQNMTGFFEDILIPVFGVSEVKRGKNVKVEKKLMPSYIL
IKMNMTDKSWHLVKNISGVTGFLGSKTTPKALTESEIQNIFNNLEAEAKEAKNSKLYEVGEIVTVTDGPFETFMGTVEEI
DQEKNRLKVSVAIFGKATPIELNFNQVKKND

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=179, Percent_Identity=43.5754189944134, Blast_Score=166, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 21615; Mature: 21484

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQSIDNILPSSEKNVKQWYVVHTASGAEKRIKEDMLRKIAKQNMTGFFEDILIPVFGV
CCHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH
SEVKRGKNVKVEKKLMPSYILIKMNMTDKSWHLVKNISGVTGFLGSKTTPKALTESEIQN
HHHHCCCCCEEHHHHCCEEEEEEEECCCCHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHH
IFNNLEAEAKEAKNSKLYEVGEIVTVTDGPFETFMGTVEEIDQEKNRLKVSVAIFGKATP
HHHHHHHHHHHHCCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCE
IELNFNQVKKND
EEECHHHCCCCC
>Mature Secondary Structure 
TAQSIDNILPSSEKNVKQWYVVHTASGAEKRIKEDMLRKIAKQNMTGFFEDILIPVFGV
CHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH
SEVKRGKNVKVEKKLMPSYILIKMNMTDKSWHLVKNISGVTGFLGSKTTPKALTESEIQN
HHHHCCCCCEEHHHHCCEEEEEEEECCCCHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHH
IFNNLEAEAKEAKNSKLYEVGEIVTVTDGPFETFMGTVEEIDQEKNRLKVSVAIFGKATP
HHHHHHHHHHHHCCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCE
IELNFNQVKKND
EEECHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]