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The map label for this gene is vacJ [C]

Identifier: 229586331

GI number: 229586331

Start: 121533

End: 122288

Strand: Direct

Name: vacJ [C]

Synonym: RAF_ORF0114

Alternate gene names: 229586331

Gene position: 121533-122288 (Clockwise)

Preceding gene: 229586330

Following gene: 229586332

Centisome position: 9.51

GC content: 34.79

Gene sequence:

>756_bases
ATGAGAATATTAATTATATTATCCATTATTTTATGTTCATTATCGATAAGAGCTGATCTTGAATATGTTGATAATGAAAT
ATATAACTATAATGGTGGAAGCAATGAGAACGGTTGCGTGGAAGTTTATGATCCATATGAAAAATTTAACCGTAAAGTGT
TTGTATTTAATTCTGTGTTAGATTATATAATATTGCGTCCTTTAGCGATAGGTTATAAGAACATCACGAATGATTACGTA
AAAGCACGAGTTAATAGTTTTGTCAGTAATGTCGATACACCGCTTACGGCGGTAAATTACGGGCTTCAGTTAAATTACGA
TAAAACTATGAAAAGCGTTTGGCGGTTTCTCATTAACACGACGCTTGGCATAGGCGGTTTATTTGACGTGGCAGGTAAAG
TAGGTTTGCCGTCTGATCGTCAAACTTTCGGTAGTACCCTTGCACATTATGGAGTTGCCCCAGGTCCTTATTTAGTATTG
CCGATAATCGGTAGTACTAACGCAAGAGATATGATGGATTCGGTAATTACTAATTATGCTCTTAATCCATTAATGTACTA
CACTCATAATGATTTTGACTTAGGAGTACTAGCAGTTAGTAAAATAAACGATCGATATGTTGTATTACCGTTTAGTGATT
ATGTGATGAAGAATTCTACCGATCCTTATGTGGCTATTAGATCAGCATTACATCGTGTTCGTGAAGCATCGGTTCAATAT
CCTGAAAATTTTAAATGTCCTAAACCCAAGAATTAA

Upstream 100 bases:

>100_bases
TTACAAAAAAATAATTTTACTATATTAACTTCGGAAGAAATAATACTAGCGGAAAACAATAAATATAGTATTATTGTTTG
TAAGAAAACAGCATAAATCA

Downstream 100 bases:

>100_bases
TGAAATTAAAGAGGATTATATGCAAAAAATTATTACAGGTTTATTTTTATTAGTTATGACGTTTTACGCTTATTCTAATG
AAAAAGTGCCTGCCGGTTTG

Product: VacJ lipoprotein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MRILIILSIILCSLSIRADLEYVDNEIYNYNGGSNENGCVEVYDPYEKFNRKVFVFNSVLDYIILRPLAIGYKNITNDYV
KARVNSFVSNVDTPLTAVNYGLQLNYDKTMKSVWRFLINTTLGIGGLFDVAGKVGLPSDRQTFGSTLAHYGVAPGPYLVL
PIIGSTNARDMMDSVITNYALNPLMYYTHNDFDLGVLAVSKINDRYVVLPFSDYVMKNSTDPYVAIRSALHRVREASVQY
PENFKCPKPKN

Sequences:

>Translated_251_residues
MRILIILSIILCSLSIRADLEYVDNEIYNYNGGSNENGCVEVYDPYEKFNRKVFVFNSVLDYIILRPLAIGYKNITNDYV
KARVNSFVSNVDTPLTAVNYGLQLNYDKTMKSVWRFLINTTLGIGGLFDVAGKVGLPSDRQTFGSTLAHYGVAPGPYLVL
PIIGSTNARDMMDSVITNYALNPLMYYTHNDFDLGVLAVSKINDRYVVLPFSDYVMKNSTDPYVAIRSALHRVREASVQY
PENFKCPKPKN
>Mature_251_residues
MRILIILSIILCSLSIRADLEYVDNEIYNYNGGSNENGCVEVYDPYEKFNRKVFVFNSVLDYIILRPLAIGYKNITNDYV
KARVNSFVSNVDTPLTAVNYGLQLNYDKTMKSVWRFLINTTLGIGGLFDVAGKVGLPSDRQTFGSTLAHYGVAPGPYLVL
PIIGSTNARDMMDSVITNYALNPLMYYTHNDFDLGVLAVSKINDRYVVLPFSDYVMKNSTDPYVAIRSALHRVREASVQY
PENFKCPKPKN

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=190, Percent_Identity=36.3157894736842, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 28304; Mature: 28304

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILIILSIILCSLSIRADLEYVDNEIYNYNGGSNENGCVEVYDPYEKFNRKVFVFNSVL
CCHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCEEEEECCHHHHCCEEEEHHHHH
DYIILRPLAIGYKNITNDYVKARVNSFVSNVDTPLTAVNYGLQLNYDKTMKSVWRFLINT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCEEECHHHHHHHHHHHHHHH
TLGIGGLFDVAGKVGLPSDRQTFGSTLAHYGVAPGPYLVLPIIGSTNARDMMDSVITNYA
HCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
LNPLMYYTHNDFDLGVLAVSKINDRYVVLPFSDYVMKNSTDPYVAIRSALHRVREASVQY
CCCEEEEECCCCCEEEEEEEECCCCEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PENFKCPKPKN
CCCCCCCCCCC
>Mature Secondary Structure
MRILIILSIILCSLSIRADLEYVDNEIYNYNGGSNENGCVEVYDPYEKFNRKVFVFNSVL
CCHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCEEEEECCHHHHCCEEEEHHHHH
DYIILRPLAIGYKNITNDYVKARVNSFVSNVDTPLTAVNYGLQLNYDKTMKSVWRFLINT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCEEECHHHHHHHHHHHHHHH
TLGIGGLFDVAGKVGLPSDRQTFGSTLAHYGVAPGPYLVLPIIGSTNARDMMDSVITNYA
HCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
LNPLMYYTHNDFDLGVLAVSKINDRYVVLPFSDYVMKNSTDPYVAIRSALHRVREASVQY
CCCEEEEECCCCCEEEEEEEECCCCEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PENFKCPKPKN
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA