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The map label for this gene is yrbC [C]

Identifier: 229586332

GI number: 229586332

Start: 122308

End: 122907

Strand: Direct

Name: yrbC [C]

Synonym: RAF_ORF0115

Alternate gene names: 229586332

Gene position: 122308-122907 (Clockwise)

Preceding gene: 229586331

Following gene: 229586333

Centisome position: 9.57

GC content: 31.17

Gene sequence:

>600_bases
ATGCAAAAAATTATTACAGGTTTATTTTTATTAGTTATGACGTTTTACGCTTATTCTAATGAAAAAGTGCCTGCCGGTTT
GAACAATTACGTTACTAATTTAGTAAATGAAGCTTCTAGTATATTAAACGATAGTAAGTTATCTGAGCGAGTAAAAATTG
CTAAAGCACGTGAGTTAATGTCTCAGAACCTAGATTTTGATTGGATGGCTAAATATACATTAGGCAGAAATGGGATAAAA
ACTTTATCAGGTGGGCAGGTTCAGGAATTCATCAAAGTTTACTCTAAATATGTTACTAAGTCTTATACTGATTTAATAAA
AGATTATAAAGGCAAACAGCCTAAAATAGTAGGAGTTCGTCCTTTAAGCTCAACCGATTTTATGGTTGCTATGAATATCA
TTAGTAATAAAGAGCAAGACCCTATTAAAGTAGAATATCTTGTACGTGAAATGAAAGGAAACGGAAAAGACGTTTTTAAA
GTTTCTGATATAATTACGGAAGGTGTAAGTCTTATTGGAGCTCAACAAGACGAGTTTACTGATACTTTAAAAAATCAAGG
CTTTAAGGCACTAATACAAAAATTAGAAAGTCGTTCTTAA

Upstream 100 bases:

>100_bases
ATTAGATCAGCATTACATCGTGTTCGTGAAGCATCGGTTCAATATCCTGAAAATTTTAAATGTCCTAAACCCAAGAATTA
ATGAAATTAAAGAGGATTAT

Downstream 100 bases:

>100_bases
GCTTATTTTACTTTCATCTTAAATTGTCATTGTGAGGAGGTATTGTTGCGTAGACACCTCGTCGTCATTGCGAGGAAATT
GCGTAGCAATTGACGAAGCA

Product: ABC-type transporter related to toluene tolerance

Products: NA

Alternate protein names: Aspartate Aminotransferase; Luene Tolerance D; Luene Tolerance Transporter

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MQKIITGLFLLVMTFYAYSNEKVPAGLNNYVTNLVNEASSILNDSKLSERVKIAKARELMSQNLDFDWMAKYTLGRNGIK
TLSGGQVQEFIKVYSKYVTKSYTDLIKDYKGKQPKIVGVRPLSSTDFMVAMNIISNKEQDPIKVEYLVREMKGNGKDVFK
VSDIITEGVSLIGAQQDEFTDTLKNQGFKALIQKLESRS

Sequences:

>Translated_199_residues
MQKIITGLFLLVMTFYAYSNEKVPAGLNNYVTNLVNEASSILNDSKLSERVKIAKARELMSQNLDFDWMAKYTLGRNGIK
TLSGGQVQEFIKVYSKYVTKSYTDLIKDYKGKQPKIVGVRPLSSTDFMVAMNIISNKEQDPIKVEYLVREMKGNGKDVFK
VSDIITEGVSLIGAQQDEFTDTLKNQGFKALIQKLESRS
>Mature_199_residues
MQKIITGLFLLVMTFYAYSNEKVPAGLNNYVTNLVNEASSILNDSKLSERVKIAKARELMSQNLDFDWMAKYTLGRNGIK
TLSGGQVQEFIKVYSKYVTKSYTDLIKDYKGKQPKIVGVRPLSSTDFMVAMNIISNKEQDPIKVEYLVREMKGNGKDVFK
VSDIITEGVSLIGAQQDEFTDTLKNQGFKALIQKLESRS

Specific function: Unknown

COG id: COG2854

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22458; Mature: 22458

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIITGLFLLVMTFYAYSNEKVPAGLNNYVTNLVNEASSILNDSKLSERVKIAKARELM
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQNLDFDWMAKYTLGRNGIKTLSGGQVQEFIKVYSKYVTKSYTDLIKDYKGKQPKIVGVR
HCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
PLSSTDFMVAMNIISNKEQDPIKVEYLVREMKGNGKDVFKVSDIITEGVSLIGAQQDEFT
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
DTLKNQGFKALIQKLESRS
HHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MQKIITGLFLLVMTFYAYSNEKVPAGLNNYVTNLVNEASSILNDSKLSERVKIAKARELM
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQNLDFDWMAKYTLGRNGIKTLSGGQVQEFIKVYSKYVTKSYTDLIKDYKGKQPKIVGVR
HCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
PLSSTDFMVAMNIISNKEQDPIKVEYLVREMKGNGKDVFKVSDIITEGVSLIGAQQDEFT
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
DTLKNQGFKALIQKLESRS
HHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA