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The map label for this gene is 227828817

Identifier: 227828817

GI number: 227828817

Start: 2409649

End: 2410317

Strand: Direct

Name: 227828817

Synonym: M1425_2591

Alternate gene names: NA

Gene position: 2409649-2410317 (Clockwise)

Preceding gene: 227828816

Following gene: 227828818

Centisome position: 92.37

GC content: 36.47

Gene sequence:

>669_bases
GTGGAAAACTTTATATCTAGGCTAATTTCGTGCAACAAGTGCCCTAGACTTACACAATATAGAAACTCCTTTCCCGATAA
TTACTGGAAAAAGCCAGTTCCTCCAAATGGTGAGATTAATGCTGAAATAGTGATAATAGGCTTAGCACCAGCAGCGAATG
GGGGAAATAGGACCGGAAGAATGTTTACCGGAGATGAGAGTTCTAATAATCTTACCAATGCTTTATATGCAGTTGGATTT
GCAAATCAGCCGTTTTCAATTTCTAAGGATGATGGCTTAAAGTTGTTTCGTGTTTACATTACCTCTGCAGTGAAATGTGC
ACCTCCACAAAATAAGCCTAATAAGGATGAGATAATTAACTGTTCAACATTCTTGGAAGAGGAGGTAAGGATGCTAGAAA
ACGCAAAAGTTTATATCGCATTTGGTAAAGTCGCATGGGATTCAATCATTTACGTTTTTAAAAAAATTGGATATAGCGTT
CCTAACGTAAAATTTTATCATGGTGCTTTAGTAAAGGTTACAAAGCCAGATATGTCAATAATATGGCTAATAGGAAGCTA
CCATCCAAGTCCAAGGAACATGAAAACTGGAAGGCTAACAATGAATATGCTGGTTGAAATATTTAGCACTGCTAAAAAGT
TGGTGAGTAATAAGGAAAGAATTACCTAA

Upstream 100 bases:

>100_bases
AATCTTGTTATTGTTAATTTTCTAAAGAAAACAATAATTAGGTATATTGCAACTAAATTGTAAATAAAAGCTTAAAATTA
TTTTGTTACAATAGAGATTA

Downstream 100 bases:

>100_bases
TTAATTAACTAACTAACTAACTCTCCTAATTCATGAAATTTGTATCATGAAGTCTAATTAAACTTTTGAGGGACGAAATA
TTGAGAAATTACACAATAAC

Product: uracil-DNA glycosylase superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MENFISRLISCNKCPRLTQYRNSFPDNYWKKPVPPNGEINAEIVIIGLAPAANGGNRTGRMFTGDESSNNLTNALYAVGF
ANQPFSISKDDGLKLFRVYITSAVKCAPPQNKPNKDEIINCSTFLEEEVRMLENAKVYIAFGKVAWDSIIYVFKKIGYSV
PNVKFYHGALVKVTKPDMSIIWLIGSYHPSPRNMKTGRLTMNMLVEIFSTAKKLVSNKERIT

Sequences:

>Translated_222_residues
MENFISRLISCNKCPRLTQYRNSFPDNYWKKPVPPNGEINAEIVIIGLAPAANGGNRTGRMFTGDESSNNLTNALYAVGF
ANQPFSISKDDGLKLFRVYITSAVKCAPPQNKPNKDEIINCSTFLEEEVRMLENAKVYIAFGKVAWDSIIYVFKKIGYSV
PNVKFYHGALVKVTKPDMSIIWLIGSYHPSPRNMKTGRLTMNMLVEIFSTAKKLVSNKERIT
>Mature_222_residues
MENFISRLISCNKCPRLTQYRNSFPDNYWKKPVPPNGEINAEIVIIGLAPAANGGNRTGRMFTGDESSNNLTNALYAVGF
ANQPFSISKDDGLKLFRVYITSAVKCAPPQNKPNKDEIINCSTFLEEEVRMLENAKVYIAFGKVAWDSIIYVFKKIGYSV
PNVKFYHGALVKVTKPDMSIIWLIGSYHPSPRNMKTGRLTMNMLVEIFSTAKKLVSNKERIT

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1105 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 24982; Mature: 24982

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENFISRLISCNKCPRLTQYRNSFPDNYWKKPVPPNGEINAEIVIIGLAPAANGGNRTGR
CHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCC
MFTGDESSNNLTNALYAVGFANQPFSISKDDGLKLFRVYITSAVKCAPPQNKPNKDEIIN
EEECCCCCCCHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHEEE
CSTFLEEEVRMLENAKVYIAFGKVAWDSIIYVFKKIGYSVPNVKFYHGALVKVTKPDMSI
HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCEE
IWLIGSYHPSPRNMKTGRLTMNMLVEIFSTAKKLVSNKERIT
EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MENFISRLISCNKCPRLTQYRNSFPDNYWKKPVPPNGEINAEIVIIGLAPAANGGNRTGR
CHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCC
MFTGDESSNNLTNALYAVGFANQPFSISKDDGLKLFRVYITSAVKCAPPQNKPNKDEIIN
EEECCCCCCCHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHEEE
CSTFLEEEVRMLENAKVYIAFGKVAWDSIIYVFKKIGYSVPNVKFYHGALVKVTKPDMSI
HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCEE
IWLIGSYHPSPRNMKTGRLTMNMLVEIFSTAKKLVSNKERIT
EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]