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The map label for this gene is pcaC [H]

Identifier: 227828671

GI number: 227828671

Start: 2254023

End: 2254460

Strand: Direct

Name: pcaC [H]

Synonym: M1425_2428

Alternate gene names: 227828671

Gene position: 2254023-2254460 (Clockwise)

Preceding gene: 227828670

Following gene: 227828672

Centisome position: 86.4

GC content: 38.13

Gene sequence:

>438_bases
ATGGGTAGCCTATTTGACAAGGACCCCGAACTAAAGAGACTTTATGAGAAAGGACTTGAAGTTAGGAAAAAGGTGATGGG
AAAGGAATACGTGGAAAGGTCATTAAGTCAAGCTACAGACTTTAATAGGGAACTCCAAGAAATGGTGACAATTTTCGCAT
GGGGGCTAATATGGACTAGAGAAGATATTATTCCAAGGAAGATAAAAAGTTTAATAAATATTGGAATACTAAGCGCTCTG
AACAGGCAAAATGAACTTAAATTACACATTAAAGGAGCAATAAGGAACGGTTGTACTGAGGAGGAGATAAAGGAGGTACT
ATTACAAGTAGGAGTTTATTGTGGTCTGCCCGCAGCCATGGAGAGCTTCAGAATAGCACAAGAGGCTATTAAGGAACTTG
AAGATGAGGAGAAAAGTGAAAAACATAAAGATAATTAG

Upstream 100 bases:

>100_bases
GAAGCGGTAAAGAAAGTCGTGATAGATTATTTCATAAGGTAATTTAAGCCTTTTTTATTTACCAAATTACTTTTTATCTT
AATATTTAACTGATATAGAT

Downstream 100 bases:

>100_bases
CAAAGACAAGAGGATAGAAGTGAGTGTTAGTATGGATCTGATAATCGTGAAAAACGGTATAGTTCCTTTCACTAAGGGAG
ATCCGAAATACTTCACTGGA

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MGSLFDKDPELKRLYEKGLEVRKKVMGKEYVERSLSQATDFNRELQEMVTIFAWGLIWTREDIIPRKIKSLINIGILSAL
NRQNELKLHIKGAIRNGCTEEEIKEVLLQVGVYCGLPAAMESFRIAQEAIKELEDEEKSEKHKDN

Sequences:

>Translated_145_residues
MGSLFDKDPELKRLYEKGLEVRKKVMGKEYVERSLSQATDFNRELQEMVTIFAWGLIWTREDIIPRKIKSLINIGILSAL
NRQNELKLHIKGAIRNGCTEEEIKEVLLQVGVYCGLPAAMESFRIAQEAIKELEDEEKSEKHKDN
>Mature_144_residues
GSLFDKDPELKRLYEKGLEVRKKVMGKEYVERSLSQATDFNRELQEMVTIFAWGLIWTREDIIPRKIKSLINIGILSALN
RQNELKLHIKGAIRNGCTEEEIKEVLLQVGVYCGLPAAMESFRIAQEAIKELEDEEKSEKHKDN

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 16764; Mature: 16632

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLFDKDPELKRLYEKGLEVRKKVMGKEYVERSLSQATDFNRELQEMVTIFAWGLIWTR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDIIPRKIKSLINIGILSALNRQNELKLHIKGAIRNGCTEEEIKEVLLQVGVYCGLPAAM
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHH
ESFRIAQEAIKELEDEEKSEKHKDN
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GSLFDKDPELKRLYEKGLEVRKKVMGKEYVERSLSQATDFNRELQEMVTIFAWGLIWTR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDIIPRKIKSLINIGILSALNRQNELKLHIKGAIRNGCTEEEIKEVLLQVGVYCGLPAAM
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHH
ESFRIAQEAIKELEDEEKSEKHKDN
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]