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The map label for this gene is sgbU [C]

Identifier: 227828575

GI number: 227828575

Start: 2144611

End: 2145420

Strand: Direct

Name: sgbU [C]

Synonym: M1425_2327

Alternate gene names: 227828575

Gene position: 2144611-2145420 (Clockwise)

Preceding gene: 227828573

Following gene: 227828576

Centisome position: 82.21

GC content: 34.81

Gene sequence:

>810_bases
ATGGATTGGAAAGTAGGAATCATATCAGACGAGATCTCTCTCGATTTCGAGCATGCAGTAAAAGTGATAAAAGAGCTAGG
TGCAAGTCACGTTGAAGTAAGAAATTTATGGAATAAGAATATAACACAAGTATCAGACTCCGAATTTTCAGAAATGAGGA
ACATTGTTGAAAAATATGGGTTAACTATTTCGAATTTAGATTCTCCTACCTTTAAAATATACATTAATGACGAGAAGGGT
TATAAAGAACACTTACAAATCTTGAGGAAGGTAATAGAGTTAAGTAAGAAATTGGACATGAACTATACTAGAATATTCAC
CTTTTGGTATGAGGGGGAATTAAAATATTATATTGATAAGCTAGCTGAGAGGTTTAACAGTGCCATTGATATAGCTGAAA
GTGAAGGTGTAACATTAGTGATAGAGAATGAGTACAGCTGTCTCGTAGGAACTGGTAAAGAACTTAGAACGTTTTTGGAC
AAAATAAAGTCAAAATGGGTTAAGGTATTGTGGGATCCTGGTAACGCATTTTTCGCTAGGGAAACACCTTATCCAGAAGG
ATACGAATTAATAAAAGATGATATCATACACTTGCACATCAAAGACGCTATGGTTAAAGATGGGCACTTCATTTGGATGC
CAGTGGGAAAAGGAATGATAGACTATAAGGGACAATTTAGGGCATTAAAGGATAAGCCATATGTAATATCTTTAGAAACT
CATTATAGAAATGCCGCAAATGACCCAGAAGCAAGTACTAAGGAGTCCTTCAATGGCTTAATGAAAATATTAAGGGAGAT
AATAAGTTGA

Upstream 100 bases:

>100_bases
AATTTAGGTACGTTAGGCTTATCTAAAGCGTATATATAAGTTTATTTAGCCAAATTTTCTATTGTCAAAAAATTTAAGCT
CAGAAAAGGTCTTATACTAC

Downstream 100 bases:

>100_bases
TATAATTGTTAAAGGAAAGTCTTATTTTAATCTCTTAATTAACCACTCAGCTACTTCTTTATACAATCTCTGGGAGTGCT
CTCGTGAAGTTGTCCGATTT

Product: xylose isomerase

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Sugar Phosphate Isomerase/Epimerase; TIM Barrel Xylose Isomerase; Xylose Isomerase Domain-Containing Protein TIM Barrel

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MDWKVGIISDEISLDFEHAVKVIKELGASHVEVRNLWNKNITQVSDSEFSEMRNIVEKYGLTISNLDSPTFKIYINDEKG
YKEHLQILRKVIELSKKLDMNYTRIFTFWYEGELKYYIDKLAERFNSAIDIAESEGVTLVIENEYSCLVGTGKELRTFLD
KIKSKWVKVLWDPGNAFFARETPYPEGYELIKDDIIHLHIKDAMVKDGHFIWMPVGKGMIDYKGQFRALKDKPYVISLET
HYRNAANDPEASTKESFNGLMKILREIIS

Sequences:

>Translated_269_residues
MDWKVGIISDEISLDFEHAVKVIKELGASHVEVRNLWNKNITQVSDSEFSEMRNIVEKYGLTISNLDSPTFKIYINDEKG
YKEHLQILRKVIELSKKLDMNYTRIFTFWYEGELKYYIDKLAERFNSAIDIAESEGVTLVIENEYSCLVGTGKELRTFLD
KIKSKWVKVLWDPGNAFFARETPYPEGYELIKDDIIHLHIKDAMVKDGHFIWMPVGKGMIDYKGQFRALKDKPYVISLET
HYRNAANDPEASTKESFNGLMKILREIIS
>Mature_269_residues
MDWKVGIISDEISLDFEHAVKVIKELGASHVEVRNLWNKNITQVSDSEFSEMRNIVEKYGLTISNLDSPTFKIYINDEKG
YKEHLQILRKVIELSKKLDMNYTRIFTFWYEGELKYYIDKLAERFNSAIDIAESEGVTLVIENEYSCLVGTGKELRTFLD
KIKSKWVKVLWDPGNAFFARETPYPEGYELIKDDIIHLHIKDAMVKDGHFIWMPVGKGMIDYKGQFRALKDKPYVISLET
HYRNAANDPEASTKESFNGLMKILREIIS

Specific function: Isomerization Of D-Arabino-6-Hexulose 3-Phosphate To D-Fructose 6-Phosphate. [C]

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.-.-.- [C]

Molecular weight: Translated: 31306; Mature: 31306

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWKVGIISDEISLDFEHAVKVIKELGASHVEVRNLWNKNITQVSDSEFSEMRNIVEKYG
CCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
LTISNLDSPTFKIYINDEKGYKEHLQILRKVIELSKKLDMNYTRIFTFWYEGELKYYIDK
CEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHH
LAERFNSAIDIAESEGVTLVIENEYSCLVGTGKELRTFLDKIKSKWVKVLWDPGNAFFAR
HHHHHHHHEECCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHEEEEECCCCEEEEE
ETPYPEGYELIKDDIIHLHIKDAMVKDGHFIWMPVGKGMIDYKGQFRALKDKPYVISLET
CCCCCCCHHHHHCCEEEEEEEHHEECCCCEEEEECCCCEECCCCCEEEECCCCEEEEEEC
HYRNAANDPEASTKESFNGLMKILREIIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDWKVGIISDEISLDFEHAVKVIKELGASHVEVRNLWNKNITQVSDSEFSEMRNIVEKYG
CCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
LTISNLDSPTFKIYINDEKGYKEHLQILRKVIELSKKLDMNYTRIFTFWYEGELKYYIDK
CEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHH
LAERFNSAIDIAESEGVTLVIENEYSCLVGTGKELRTFLDKIKSKWVKVLWDPGNAFFAR
HHHHHHHHEECCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHEEEEECCCCEEEEE
ETPYPEGYELIKDDIIHLHIKDAMVKDGHFIWMPVGKGMIDYKGQFRALKDKPYVISLET
CCCCCCCHHHHHCCEEEEEEEHHEECCCCEEEEECCCCEECCCCCEEEECCCCEEEEEEC
HYRNAANDPEASTKESFNGLMKILREIIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA