| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
Click here to switch to the map view.
The map label for this gene is 227828573
Identifier: 227828573
GI number: 227828573
Start: 2141821
End: 2142051
Strand: Direct
Name: 227828573
Synonym: M1425_2325
Alternate gene names: NA
Gene position: 2141821-2142051 (Clockwise)
Preceding gene: 227828572
Following gene: 227828575
Centisome position: 82.1
GC content: 32.47
Gene sequence:
>231_bases TTGGCAGTCGTAGATGCATCAGTTGTAATAAAGTGGTTCGCCAATGAAAATTATAGCAGAGAATCACTAATTCTTAAGGA AGCATATGTAAAAGGCTTAGAGGATTTATCTGCGCCTTGTATCCTTCCCTTTGAAGTTTTGAACGGATTAAAGTATACTT ATAATCTAGGAGAGAAAGAATTAGAAGAAGAAGACTTACATTTCATAATTCACATAAAGGATTTTAAATAA
Upstream 100 bases:
>100_bases TATAGGAGAATCTCCGTAGCCTCGGTGAGATCTTATGAATTCTTCTTAAATTACGGCGGTAAGAATTCCGAAGAAGTTAT AAGGGAATGGCGTAAAAAAA
Downstream 100 bases:
>100_bases TAAGCACAATTCATATTGACTGTAATGTTACTATTCAATTAAGCTATTTAAAAGATAGTTAATTCTTAGTCTACGTTTTA ATTCATATGAAAAATACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: PilT Domain-Containing Protein
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MAVVDASVVIKWFANENYSRESLILKEAYVKGLEDLSAPCILPFEVLNGLKYTYNLGEKELEEEDLHFIIHIKDFK
Sequences:
>Translated_76_residues MAVVDASVVIKWFANENYSRESLILKEAYVKGLEDLSAPCILPFEVLNGLKYTYNLGEKELEEEDLHFIIHIKDFK >Mature_75_residues AVVDASVVIKWFANENYSRESLILKEAYVKGLEDLSAPCILPFEVLNGLKYTYNLGEKELEEEDLHFIIHIKDFK
Specific function: Unknown
COG id: COG4113
COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8791; Mature: 8660
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVDASVVIKWFANENYSRESLILKEAYVKGLEDLSAPCILPFEVLNGLKYTYNLGEKE CCEECHHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCEEEECCCCCC LEEEDLHFIIHIKDFK CCCCCEEEEEEEECCC >Mature Secondary Structure AVVDASVVIKWFANENYSRESLILKEAYVKGLEDLSAPCILPFEVLNGLKYTYNLGEKE CEECHHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCEEEECCCCCC LEEEDLHFIIHIKDFK CCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA