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The map label for this gene is ymfB [C]

Identifier: 227828456

GI number: 227828456

Start: 2016517

End: 2016996

Strand: Direct

Name: ymfB [C]

Synonym: M1425_2205

Alternate gene names: 227828456

Gene position: 2016517-2016996 (Clockwise)

Preceding gene: 227828453

Following gene: 227828457

Centisome position: 77.3

GC content: 37.92

Gene sequence:

>480_bases
ATGAACATAAGCAAACTTCTTCAGCTACCACTAACTGATGATAGTGAGAGCGATGCTGCAGTTGTAGTATTAATAGCTAA
AGGCCAGTATATCTTGTTGATAAAAAGAGTTATTAACCCAAAGGACCCATGGTCAGGTCAAATGGCGTTGCCAGGTGGTC
ATAGAGAAGATAATGAGACTACTCTTAAAGCAGCTATTAGAGAATGTGAGGAGGAAATTGGAATCAGGCCAAATATAAGG
TCCAGTCTAGGAGTATTCTCACCTAATAATGCTAGAATAAAAGTTAGGGCATATATTGCATTACTTGATGAGCTAATAGA
ACCAAGGCCAAATCCAGCGGAGGTGGATAAGGTATTTTGGGTTCACGAGAGTGAATTTGCAAGGGGCGATAACGCGTTTT
ATTATAAGCAATATAGAATTTGGGGGATGACGTATAGGATACTTTCTAAATTGTTTGAAATAGCTGAACTTAAAATTTAA

Upstream 100 bases:

>100_bases
ACCTCTTTTTTCTATCATCTTTTTAAGCATTTTTCCATTTGATAAGATGTAGAGGTAGCAGCGCATAAAAATTAATTGGA
ACTGTTTTGAGTTTCTAATT

Downstream 100 bases:

>100_bases
ATTTTATATATAGTTAACGGCAATTGAATGATAAGAGCTGAGATTCCAATATCGTTATATAAAACTTTTCAAGAGGTAAT
AAAAGATATAGTAGTCAGTG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: MutT/Nudix Family Protein; Nudix Hydroxylase; Phosphohydrolase; NUDIX Domain-Containing Protein; Hydrolase NUDIX Family Protein

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MNISKLLQLPLTDDSESDAAVVVLIAKGQYILLIKRVINPKDPWSGQMALPGGHREDNETTLKAAIRECEEEIGIRPNIR
SSLGVFSPNNARIKVRAYIALLDELIEPRPNPAEVDKVFWVHESEFARGDNAFYYKQYRIWGMTYRILSKLFEIAELKI

Sequences:

>Translated_159_residues
MNISKLLQLPLTDDSESDAAVVVLIAKGQYILLIKRVINPKDPWSGQMALPGGHREDNETTLKAAIRECEEEIGIRPNIR
SSLGVFSPNNARIKVRAYIALLDELIEPRPNPAEVDKVFWVHESEFARGDNAFYYKQYRIWGMTYRILSKLFEIAELKI
>Mature_159_residues
MNISKLLQLPLTDDSESDAAVVVLIAKGQYILLIKRVINPKDPWSGQMALPGGHREDNETTLKAAIRECEEEIGIRPNIR
SSLGVFSPNNARIKVRAYIALLDELIEPRPNPAEVDKVFWVHESEFARGDNAFYYKQYRIWGMTYRILSKLFEIAELKI

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.-.- [C]

Molecular weight: Translated: 18172; Mature: 18172

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISKLLQLPLTDDSESDAAVVVLIAKGQYILLIKRVINPKDPWSGQMALPGGHREDNET
CCHHHEEECCCCCCCCCCCEEEEEEECCCEEEEEEHHCCCCCCCCCEEECCCCCCCCCHH
TLKAAIRECEEEIGIRPNIRSSLGVFSPNNARIKVRAYIALLDELIEPRPNPAEVDKVFW
HHHHHHHHHHHHCCCCCCCHHHCCEECCCCCEEEEHHHHHHHHHHHCCCCCCCCCCEEEE
VHESEFARGDNAFYYKQYRIWGMTYRILSKLFEIAELKI
EECCHHCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNISKLLQLPLTDDSESDAAVVVLIAKGQYILLIKRVINPKDPWSGQMALPGGHREDNET
CCHHHEEECCCCCCCCCCCEEEEEEECCCEEEEEEHHCCCCCCCCCEEECCCCCCCCCHH
TLKAAIRECEEEIGIRPNIRSSLGVFSPNNARIKVRAYIALLDELIEPRPNPAEVDKVFW
HHHHHHHHHHHHCCCCCCCHHHCCEECCCCCEEEEHHHHHHHHHHHCCCCCCCCCCEEEE
VHESEFARGDNAFYYKQYRIWGMTYRILSKLFEIAELKI
EECCHHCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA