| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
Click here to switch to the map view.
The map label for this gene is 227828453
Identifier: 227828453
GI number: 227828453
Start: 2015527
End: 2016270
Strand: Direct
Name: 227828453
Synonym: M1425_2203
Alternate gene names: NA
Gene position: 2015527-2016270 (Clockwise)
Preceding gene: 227828452
Following gene: 227828456
Centisome position: 77.26
GC content: 35.75
Gene sequence:
>744_bases GTGAGAGTCTTGAGGAGTAGTTTTCTGTTAGCTTTTACAATATTTTATGGATGGTCCTCAATAAGGAGAGGATTTGTGTA CGTATTAACTTATCTCAGTATACCTCTAGCTGAATTATTTTTAATATATATTATCACGAGGGGGGATTTCGTAAAGTTCG CCATCGTTGGAGGATTAATTAGCGTTATGGCCAATAACGGATTTTCACTAATTGGCGATCTAGTGTTCTTAAGACTTGAA AGTAGACTTCAAGATTTATTGGTTGCAACTAGCATAGGGCCTAGTGACTATATCATGGGATTAATGCTTGCAAATTTACT ATATTCCTCCCCAGGTGTTATACTATACATTATGCTTGCAGTAATTTACCACGTTTTGACTTTAACCAACTTCATACCAT TATTAATTGATGTCACTCTTCTCCTGTTCTCAACATCCTCCATAGGGTTCTTCTTAGCTAGTCTAGTTCCTCATACGAGA TATGGTTGGGGTCTTGCTGGTCTTTTATCTAGCATTTTAACTATAATACCACCAGTATTTTATCCTTATACATTCCTCCC TAAGTCTCTTTACATTCCCTTGCTTATATTACCAACTACAGCTTCTGCAATATTCTCACAAGGAATCACAAATTTGGTAA ATACAAGCGTAGAAATGTTAGTTGTATCGTTTCTAGTTCTGTTACTCGAATCTATATTGTTCTTTTTCCTCTCTGTTAGA TTTAGCAGATGGAGAGAAAGATGA
Upstream 100 bases:
>100_bases TTAAGGATTAGTTATGTGGATAGGAATGAAGCATCTGATTATGTAGGAAAATATGTTATTAAGCCAATTACGTTGGAGGA TCTGTTCATAATTTACGGAG
Downstream 100 bases:
>100_bases TAACAAAGAGGAATTAGACTTAACTTCATACTCTATAAATACATAACCACAATTAGGGCACTTTTTCACAACCTTATTAT TAACGTGTTCCACCAAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: ABC-Type Multidrug Transport System Permease Component; ABC-2 Type Transport System Membrane Protein
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MRVLRSSFLLAFTIFYGWSSIRRGFVYVLTYLSIPLAELFLIYIITRGDFVKFAIVGGLISVMANNGFSLIGDLVFLRLE SRLQDLLVATSIGPSDYIMGLMLANLLYSSPGVILYIMLAVIYHVLTLTNFIPLLIDVTLLLFSTSSIGFFLASLVPHTR YGWGLAGLLSSILTIIPPVFYPYTFLPKSLYIPLLILPTTASAIFSQGITNLVNTSVEMLVVSFLVLLLESILFFFLSVR FSRWRER
Sequences:
>Translated_247_residues MRVLRSSFLLAFTIFYGWSSIRRGFVYVLTYLSIPLAELFLIYIITRGDFVKFAIVGGLISVMANNGFSLIGDLVFLRLE SRLQDLLVATSIGPSDYIMGLMLANLLYSSPGVILYIMLAVIYHVLTLTNFIPLLIDVTLLLFSTSSIGFFLASLVPHTR YGWGLAGLLSSILTIIPPVFYPYTFLPKSLYIPLLILPTTASAIFSQGITNLVNTSVEMLVVSFLVLLLESILFFFLSVR FSRWRER >Mature_247_residues MRVLRSSFLLAFTIFYGWSSIRRGFVYVLTYLSIPLAELFLIYIITRGDFVKFAIVGGLISVMANNGFSLIGDLVFLRLE SRLQDLLVATSIGPSDYIMGLMLANLLYSSPGVILYIMLAVIYHVLTLTNFIPLLIDVTLLLFSTSSIGFFLASLVPHTR YGWGLAGLLSSILTIIPPVFYPYTFLPKSLYIPLLILPTTASAIFSQGITNLVNTSVEMLVVSFLVLLLESILFFFLSVR FSRWRER
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27710; Mature: 27710
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLRSSFLLAFTIFYGWSSIRRGFVYVLTYLSIPLAELFLIYIITRGDFVKFAIVGGLI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH SVMANNGFSLIGDLVFLRLESRLQDLLVATSIGPSDYIMGLMLANLLYSSPGVILYIMLA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH VIYHVLTLTNFIPLLIDVTLLLFSTSSIGFFLASLVPHTRYGWGLAGLLSSILTIIPPVF HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHH YPYTFLPKSLYIPLLILPTTASAIFSQGITNLVNTSVEMLVVSFLVLLLESILFFFLSVR CCHHHCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSRWRER HHHHCCC >Mature Secondary Structure MRVLRSSFLLAFTIFYGWSSIRRGFVYVLTYLSIPLAELFLIYIITRGDFVKFAIVGGLI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH SVMANNGFSLIGDLVFLRLESRLQDLLVATSIGPSDYIMGLMLANLLYSSPGVILYIMLA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH VIYHVLTLTNFIPLLIDVTLLLFSTSSIGFFLASLVPHTRYGWGLAGLLSSILTIIPPVF HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHH YPYTFLPKSLYIPLLILPTTASAIFSQGITNLVNTSVEMLVVSFLVLLLESILFFFLSVR CCHHHCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSRWRER HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA