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The map label for this gene is ocd2 [H]

Identifier: 227827990

GI number: 227827990

Start: 1604385

End: 1605314

Strand: Direct

Name: ocd2 [H]

Synonym: M1425_1726

Alternate gene names: 227827990

Gene position: 1604385-1605314 (Clockwise)

Preceding gene: 227827988

Following gene: 227827993

Centisome position: 61.5

GC content: 35.7

Gene sequence:

>930_bases
ATGATTATCTTAACAAGAAAAGATCTAGATGAACTGTTCAAAGCTGAAATAGCCGTAAACTCAGTAAGAGAGGCGTTCAA
ACTAAATTATCATAAGAAGATAAATCAACCACAACGTTTAGTGATGAGTATAAAGGGAAATTGGTGGGGTCTAATGCCCT
CATCTACTGATTATTCTTTTGTAACAAAAATAGTTAACGTTATACTTGAGAACAAAGAAAGAGGTTTACCGTCAGTTCAA
GGCGTTGTAATATTGATGTCACCAGATTCCGGAGAAGTTTTAGCGATAATTGATGGAACAACATTAACTGCAATAAGAAC
TGCTGCAGCAAGTGTATTATCAACGGAAATAGCCATAAATGGTAGAAATATTGGCAATTTGGGAATAATAGGTGCGGGAA
CTGAAGCGTATTATCACGCCAAGTTAGCCTTAGAGTACTTCAAAGTTCAGAAAATTTACATTTCTGCTAGAAAATCTCAC
TTCGAATTGGCTAGGAAAATTGGCGGTGAGGCTACAGATTTAGAGACATTATTGAAGAATTCAGATATCATTTTTGCAAC
CACTTCATCCAATGTTCCAGTAGTCTTAGGAAAATATCTAAAGGACGTATTTCATGTATCAAGTATAGGTGCCCATACTC
CCGATTCAAGAGAGATAGACGATGATACTATAGTAAAGGTAAAAAGTTATATTGTCGACTCATTGGAAGCGGTTTCTAAA
GAGAGCGGTGATTATATTATTCCTAAACAAAGGGGATTATTGGAAAATAAGATGATAAAGGAATTAGGGGAGATAATAGA
TAAGGGTATAAAGGTAGAGAGGCCGTCATTATTTAAAACCGTGGGAATTGCAGCTGAGGATAATGTAACTGCCCATATAG
CTTACAAAGAAGCTTCAAAAAGAGGAATTGGAGTTAACGTTTCCATATAA

Upstream 100 bases:

>100_bases
TTAAATAATACTGCATATAGTCCTAGGGTTAATTCTTATATTGATCAGAATATTCCAAAATAATGTTAAAGTTTATAATC
GATAAAAAGATCTTAACTTA

Downstream 100 bases:

>100_bases
TTTCTTGCACATTCTCTTGCTTATTAACATATAACGCTAAAACAAATAGTAGTGAGGATAGGCGATTAAGATATTTAACG
TGGACGTCCTTTGCCCTATT

Product: ornithine cyclodeaminase/mu-crystallin

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MIILTRKDLDELFKAEIAVNSVREAFKLNYHKKINQPQRLVMSIKGNWWGLMPSSTDYSFVTKIVNVILENKERGLPSVQ
GVVILMSPDSGEVLAIIDGTTLTAIRTAAASVLSTEIAINGRNIGNLGIIGAGTEAYYHAKLALEYFKVQKIYISARKSH
FELARKIGGEATDLETLLKNSDIIFATTSSNVPVVLGKYLKDVFHVSSIGAHTPDSREIDDDTIVKVKSYIVDSLEAVSK
ESGDYIIPKQRGLLENKMIKELGEIIDKGIKVERPSLFKTVGIAAEDNVTAHIAYKEASKRGIGVNVSI

Sequences:

>Translated_309_residues
MIILTRKDLDELFKAEIAVNSVREAFKLNYHKKINQPQRLVMSIKGNWWGLMPSSTDYSFVTKIVNVILENKERGLPSVQ
GVVILMSPDSGEVLAIIDGTTLTAIRTAAASVLSTEIAINGRNIGNLGIIGAGTEAYYHAKLALEYFKVQKIYISARKSH
FELARKIGGEATDLETLLKNSDIIFATTSSNVPVVLGKYLKDVFHVSSIGAHTPDSREIDDDTIVKVKSYIVDSLEAVSK
ESGDYIIPKQRGLLENKMIKELGEIIDKGIKVERPSLFKTVGIAAEDNVTAHIAYKEASKRGIGVNVSI
>Mature_309_residues
MIILTRKDLDELFKAEIAVNSVREAFKLNYHKKINQPQRLVMSIKGNWWGLMPSSTDYSFVTKIVNVILENKERGLPSVQ
GVVILMSPDSGEVLAIIDGTTLTAIRTAAASVLSTEIAINGRNIGNLGIIGAGTEAYYHAKLALEYFKVQKIYISARKSH
FELARKIGGEATDLETLLKNSDIIFATTSSNVPVVLGKYLKDVFHVSSIGAHTPDSREIDDDTIVKVKSYIVDSLEAVSK
ESGDYIIPKQRGLLENKMIKELGEIIDKGIKVERPSLFKTVGIAAEDNVTAHIAYKEASKRGIGVNVSI

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=282, Percent_Identity=33.6879432624113, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI62241008, Length=280, Percent_Identity=33.9285714285714, Blast_Score=134, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 33919; Mature: 33919

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILTRKDLDELFKAEIAVNSVREAFKLNYHKKINQPQRLVMSIKGNWWGLMPSSTDYSF
CEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCEEECCCCCCCHHH
VTKIVNVILENKERGLPSVQGVVILMSPDSGEVLAIIDGTTLTAIRTAAASVLSTEIAIN
HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHEEEEEC
GRNIGNLGIIGAGTEAYYHAKLALEYFKVQKIYISARKSHFELARKIGGEATDLETLLKN
CCCCCCEEEEECCCHHEEHHHHHHHHHHHHHHEEHHHHHHHHHHHHHCCCHHHHHHHHCC
SDIIFATTSSNVPVVLGKYLKDVFHVSSIGAHTPDSREIDDDTIVKVKSYIVDSLEAVSK
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
ESGDYIIPKQRGLLENKMIKELGEIIDKGIKVERPSLFKTVGIAAEDNVTAHIAYKEASK
CCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCEEEEEEEECCCC
RGIGVNVSI
CCCEEEEEC
>Mature Secondary Structure
MIILTRKDLDELFKAEIAVNSVREAFKLNYHKKINQPQRLVMSIKGNWWGLMPSSTDYSF
CEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCEEECCCCCCCHHH
VTKIVNVILENKERGLPSVQGVVILMSPDSGEVLAIIDGTTLTAIRTAAASVLSTEIAIN
HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHEEEEEC
GRNIGNLGIIGAGTEAYYHAKLALEYFKVQKIYISARKSHFELARKIGGEATDLETLLKN
CCCCCCEEEEECCCHHEEHHHHHHHHHHHHHHEEHHHHHHHHHHHHHCCCHHHHHHHHCC
SDIIFATTSSNVPVVLGKYLKDVFHVSSIGAHTPDSREIDDDTIVKVKSYIVDSLEAVSK
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
ESGDYIIPKQRGLLENKMIKELGEIIDKGIKVERPSLFKTVGIAAEDNVTAHIAYKEASK
CCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCEEEEEEEECCCC
RGIGVNVSI
CCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]