| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227827814
Identifier: 227827814
GI number: 227827814
Start: 1439312
End: 1440199
Strand: Direct
Name: 227827814
Synonym: M1425_1547
Alternate gene names: NA
Gene position: 1439312-1440199 (Clockwise)
Preceding gene: 227827813
Following gene: 227827816
Centisome position: 55.17
GC content: 34.68
Gene sequence:
>888_bases TTGGCATATAATATTCTGGATTCTAATCCAATAGTTTTTGATAGAAGACGTTTTCCGGGTAAGAAGTGTACTGGTGTAAT AAGCCGAAAAACATTTTTAGAGCTTGGTGTTAGTAGACAATTCATAGATAGAGAATTTAAATCAATAGAAATAAAATATG ATCGAGGGTACACAATTTATGTAGATACCGATGTTATCAGACTGAATAGGGAAAACTTAGAAATATGGCTTGATGGGGAA GTAAAGACAAAGAGACCAAGAGATGCAATAATTAATGGCAATACTGTGATATCAGGAAATGAAAAATATGAGGGAATAGT AGTAGATTGTAGTGGTTGGAAAGGTAATGCTAAATGGATTAAGGCAATAGAGTATTTGACGGAACCGATAAACGAGGAAA GCATTATTGTTTATATAGATTCTAAAAACGTTGGAGGGTTTAGTTGGATAGTTCCTTTACCATATGGAACCTTAGTGGGT GCGATCTCGTATAGTGATCCAAAGGCGTTTCTGCCTAATATTAATAAAAGGATTTTAGACATTCATGGGGGAGCAATTCC ACGCGTCTCACCTGTATCTAACATAAAAACGTTGAAGTTTGGTGATTCGACTGGACTTATAAAAACATTTACTGGTGGGG GCATATTTGGTATCGCAAGCTTATTATATCCCTTAGTAAATGGAATTCGCAGTGGGAAATTCAATGAGTATCATTCCAAG TATAAGATTTTAGCTAAAGAGATAAGAAGACAATACTATATAACTAGATTTCTGGAATCCGCTTGGAAGCTTCTTCCAGT TCTATTTAAGTTATATAACGATAAAACGCTCAACATTTCCGAAGAGTTTGACTTACATTCACTTCTTATCCATAGATTTC CTCACTAA
Upstream 100 bases:
>100_bases ATTATATAGTGGAAAAACTGGGGGCTAAGAAATATACTATAAATGAGGCTGATAGATCATCGGAGTTCTAATAGTAGGCG GGGGATTAGCTGGGCTATTA
Downstream 100 bases:
>100_bases ATTATAGCATCCTTCCCCTTTTTCTATTATTCCCATTTCTATTAGCTTAGATATTACAGCCTGAGGGTTGGAAATGCCCC TAGCCTTAAGATCTATTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MAYNILDSNPIVFDRRRFPGKKCTGVISRKTFLELGVSRQFIDREFKSIEIKYDRGYTIYVDTDVIRLNRENLEIWLDGE VKTKRPRDAIINGNTVISGNEKYEGIVVDCSGWKGNAKWIKAIEYLTEPINEESIIVYIDSKNVGGFSWIVPLPYGTLVG AISYSDPKAFLPNINKRILDIHGGAIPRVSPVSNIKTLKFGDSTGLIKTFTGGGIFGIASLLYPLVNGIRSGKFNEYHSK YKILAKEIRRQYYITRFLESAWKLLPVLFKLYNDKTLNISEEFDLHSLLIHRFPH
Sequences:
>Translated_295_residues MAYNILDSNPIVFDRRRFPGKKCTGVISRKTFLELGVSRQFIDREFKSIEIKYDRGYTIYVDTDVIRLNRENLEIWLDGE VKTKRPRDAIINGNTVISGNEKYEGIVVDCSGWKGNAKWIKAIEYLTEPINEESIIVYIDSKNVGGFSWIVPLPYGTLVG AISYSDPKAFLPNINKRILDIHGGAIPRVSPVSNIKTLKFGDSTGLIKTFTGGGIFGIASLLYPLVNGIRSGKFNEYHSK YKILAKEIRRQYYITRFLESAWKLLPVLFKLYNDKTLNISEEFDLHSLLIHRFPH >Mature_294_residues AYNILDSNPIVFDRRRFPGKKCTGVISRKTFLELGVSRQFIDREFKSIEIKYDRGYTIYVDTDVIRLNRENLEIWLDGEV KTKRPRDAIINGNTVISGNEKYEGIVVDCSGWKGNAKWIKAIEYLTEPINEESIIVYIDSKNVGGFSWIVPLPYGTLVGA ISYSDPKAFLPNINKRILDIHGGAIPRVSPVSNIKTLKFGDSTGLIKTFTGGGIFGIASLLYPLVNGIRSGKFNEYHSKY KILAKEIRRQYYITRFLESAWKLLPVLFKLYNDKTLNISEEFDLHSLLIHRFPH
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33720; Mature: 33589
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYNILDSNPIVFDRRRFPGKKCTGVISRKTFLELGVSRQFIDREFKSIEIKYDRGYTIY CEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCEEEE VDTDVIRLNRENLEIWLDGEVKTKRPRDAIINGNTVISGNEKYEGIVVDCSGWKGNAKWI EECEEEEEECCCEEEEECCCEECCCCCCEEECCCEEECCCCCCCEEEEECCCCCCCHHHH KAIEYLTEPINEESIIVYIDSKNVGGFSWIVPLPYGTLVGAISYSDPKAFLPNINKRILD HHHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCHHEEEEECCCCHHHCCCCCCEEEE IHGGAIPRVSPVSNIKTLKFGDSTGLIKTFTGGGIFGIASLLYPLVNGIRSGKFNEYHSK ECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHH YKILAKEIRRQYYITRFLESAWKLLPVLFKLYNDKTLNISEEFDLHSLLIHRFPH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCC >Mature Secondary Structure AYNILDSNPIVFDRRRFPGKKCTGVISRKTFLELGVSRQFIDREFKSIEIKYDRGYTIY EEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCEEEE VDTDVIRLNRENLEIWLDGEVKTKRPRDAIINGNTVISGNEKYEGIVVDCSGWKGNAKWI EECEEEEEECCCEEEEECCCEECCCCCCEEECCCEEECCCCCCCEEEEECCCCCCCHHHH KAIEYLTEPINEESIIVYIDSKNVGGFSWIVPLPYGTLVGAISYSDPKAFLPNINKRILD HHHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCHHEEEEECCCCHHHCCCCCCEEEE IHGGAIPRVSPVSNIKTLKFGDSTGLIKTFTGGGIFGIASLLYPLVNGIRSGKFNEYHSK ECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHH YKILAKEIRRQYYITRFLESAWKLLPVLFKLYNDKTLNISEEFDLHSLLIHRFPH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA