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The map label for this gene is 227827553

Identifier: 227827553

GI number: 227827553

Start: 1217648

End: 1217920

Strand: Direct

Name: 227827553

Synonym: M1425_1280

Alternate gene names: NA

Gene position: 1217648-1217920 (Clockwise)

Preceding gene: 227827550

Following gene: 227827554

Centisome position: 46.67

GC content: 27.84

Gene sequence:

>273_bases
ATGAAAAACAACTTTAATGAAATTGGCACATTTACAAAGAATGTTTTAAAAGATAAGATTCTTATTAAATTAAAGAGTGA
TTTAGACTTTACGAAGTACAACATAATAGGAAAGGCTATATATAATGGAAAGGAGCAGAAAATAGGAAAGATCCTAGATG
TATTAGGAAACGTAAAAGAACCTTATGCTTTAGCTATGTTAGATAAAAATTCAAAAATTTTAGTGAACGAGAAAATATTC
GTTAGTTATAGTGAGAGGAGGGCAAGAAAATGA

Upstream 100 bases:

>100_bases
CTTCAGTAAGCCCTAAAAATGAGCTTCGCCAGTTAAGATGAATACATGGGTATTATCAACAAATAATAATAAACCCATAT
AGACGTAACATAAAAATGAG

Downstream 100 bases:

>100_bases
AATGTCCATTTTGTGGAACGGAGGACACAATAACATATGATATGGAAAAGGGAATGTACGTATGTACAAACTGCGGCAGT
GTAATAGAAGATAATGCAGT

Product: H/ACA RNA-protein complex component Gar1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MKNNFNEIGTFTKNVLKDKILIKLKSDLDFTKYNIIGKAIYNGKEQKIGKILDVLGNVKEPYALAMLDKNSKILVNEKIF
VSYSERRARK

Sequences:

>Translated_90_residues
MKNNFNEIGTFTKNVLKDKILIKLKSDLDFTKYNIIGKAIYNGKEQKIGKILDVLGNVKEPYALAMLDKNSKILVNEKIF
VSYSERRARK
>Mature_90_residues
MKNNFNEIGTFTKNVLKDKILIKLKSDLDFTKYNIIGKAIYNGKEQKIGKILDVLGNVKEPYALAMLDKNSKILVNEKIF
VSYSERRARK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10381; Mature: 10381

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNFNEIGTFTKNVLKDKILIKLKSDLDFTKYNIIGKAIYNGKEQKIGKILDVLGNVKE
CCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
PYALAMLDKNSKILVNEKIFVSYSERRARK
CEEEEEECCCCEEEECCEEEEEEHHHCCCC
>Mature Secondary Structure
MKNNFNEIGTFTKNVLKDKILIKLKSDLDFTKYNIIGKAIYNGKEQKIGKILDVLGNVKE
CCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
PYALAMLDKNSKILVNEKIFVSYSERRARK
CEEEEEECCCCEEEECCEEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA