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The map label for this gene is gatC

Identifier: 227827541

GI number: 227827541

Start: 1208114

End: 1208407

Strand: Direct

Name: gatC

Synonym: M1425_1268

Alternate gene names: 227827541

Gene position: 1208114-1208407 (Clockwise)

Preceding gene: 227827538

Following gene: 227827542

Centisome position: 46.31

GC content: 29.59

Gene sequence:

>294_bases
ATGAAAATAGAGGTCAATAAGAATTTAATTAAACATTTAGAAAACTTATCTTTAATTCAATTAAGTCAGAATGAAGAAAA
AATGTTGGAAAATGATATAACAAATATCATAAAATTCTTTGAGAAGATAAACGAGCTTGATTTAAGTAATGTAGAACCAC
TATTTCATCCTCTCCCTCAAGGGAGACTAAGGAAAGATACTCCAAGAGATCCATTAGATAGGGAAAATGCACTCAAAAAC
GTGAAAAGAAAAGAAAACGGATATATAGTAGGACCTAGAACTTACGGTGAATAA

Upstream 100 bases:

>100_bases
TGAGGAAAAAGCTAGTTTAAAATGTATCGTGGCCATTAGATTTAATTTAGGCAGATTTTTGCTGAATGAAAATATAAACT
AGTTCTCTGAAGTGTTATCA

Downstream 100 bases:

>100_bases
GATTATGATAGTGGAATTAGTCAATGATTTGAAAAATAAGAATTTAGAGGCTGAAGAATACGTTGAGAGAACTTATGAGA
AAATAGGCAAATACGATAAG

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKIEVNKNLIKHLENLSLIQLSQNEEKMLENDITNIIKFFEKINELDLSNVEPLFHPLPQGRLRKDTPRDPLDRENALKN
VKRKENGYIVGPRTYGE

Sequences:

>Translated_97_residues
MKIEVNKNLIKHLENLSLIQLSQNEEKMLENDITNIIKFFEKINELDLSNVEPLFHPLPQGRLRKDTPRDPLDRENALKN
VKRKENGYIVGPRTYGE
>Mature_97_residues
MKIEVNKNLIKHLENLSLIQLSQNEEKMLENDITNIIKFFEKINELDLSNVEPLFHPLPQGRLRKDTPRDPLDRENALKN
VKRKENGYIVGPRTYGE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_SULIA (C3N5C6)

Other databases:

- EMBL:   CP001401
- RefSeq:   YP_002843246.1
- GeneID:   7812527
- GenomeReviews:   CP001401_GR
- KEGG:   sim:M1627_1318
- OMA:   PLFHPIS
- ProtClustDB:   PRK00034
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 11396; Mature: 11396

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEVNKNLIKHLENLSLIQLSQNEEKMLENDITNIIKFFEKINELDLSNVEPLFHPLPQ
CCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC
GRLRKDTPRDPLDRENALKNVKRKENGYIVGPRTYGE
CCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCC
>Mature Secondary Structure
MKIEVNKNLIKHLENLSLIQLSQNEEKMLENDITNIIKFFEKINELDLSNVEPLFHPLPQ
CCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC
GRLRKDTPRDPLDRENALKNVKRKENGYIVGPRTYGE
CCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA