| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227827538
Identifier: 227827538
GI number: 227827538
Start: 1205495
End: 1206001
Strand: Direct
Name: 227827538
Synonym: M1425_1265
Alternate gene names: NA
Gene position: 1205495-1206001 (Clockwise)
Preceding gene: 227827536
Following gene: 227827541
Centisome position: 46.21
GC content: 32.15
Gene sequence:
>507_bases ATGCCTTACGTAGACGTTGACAGCAAAATATGTAGACCTAATGAGGTAAAGGAAATAAAAGAGGGAGATATAATATTAGT ATATCCTGCTACTCTAAACGTAAATGGAAAAATAGTAACTTTCCCCCCGCTTTCATTAATTAGCGAGGAGTGCACAAACG AGATTAAAAATTTGAGCTGGGTAGAAGGTATAATAGTAAACCAAGAAATATTTCATAACGTGACTTTTCTCAAATGTGAA AACTATATTGAAGGAGAGATAGAAATTTTAGAACCTACCCTTCTTACAGCTTTCACTTTTAAACACATGATTGGAGGTAA AATAAAAGGCTACACAAGCCAGCTTATTAAAGGTATACCTCTATTAAAAGTAAATAACCAACCAATAATAAGCATAGATA AGGGAAAAGTTAGCGTTGGACTCTGTTTTTTAGATAAGAGAGATATTCTAGTAAGATTATTGGGATATTCTATATTTTAC TACATAAATCCATCCTTATCGATCTAA
Upstream 100 bases:
>100_bases CATATTCATCAGCCTGGTTACTCATCAACCATTCAGTCCTTACAAGTCCATACATCCTTAATATTTTTTATTTGTAGTAT ATCTCTTAATATTGCTTAAT
Downstream 100 bases:
>100_bases AGGACTAAGTTTATCTTGATCCTTATCGAAGTTTTCGGAGGATTGATAAGGTATACCCTCAAATGTGAGAATATCAGTTT CTTTTCTCTTTTTAGCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MPYVDVDSKICRPNEVKEIKEGDIILVYPATLNVNGKIVTFPPLSLISEECTNEIKNLSWVEGIIVNQEIFHNVTFLKCE NYIEGEIEILEPTLLTAFTFKHMIGGKIKGYTSQLIKGIPLLKVNNQPIISIDKGKVSVGLCFLDKRDILVRLLGYSIFY YINPSLSI
Sequences:
>Translated_168_residues MPYVDVDSKICRPNEVKEIKEGDIILVYPATLNVNGKIVTFPPLSLISEECTNEIKNLSWVEGIIVNQEIFHNVTFLKCE NYIEGEIEILEPTLLTAFTFKHMIGGKIKGYTSQLIKGIPLLKVNNQPIISIDKGKVSVGLCFLDKRDILVRLLGYSIFY YINPSLSI >Mature_167_residues PYVDVDSKICRPNEVKEIKEGDIILVYPATLNVNGKIVTFPPLSLISEECTNEIKNLSWVEGIIVNQEIFHNVTFLKCEN YIEGEIEILEPTLLTAFTFKHMIGGKIKGYTSQLIKGIPLLKVNNQPIISIDKGKVSVGLCFLDKRDILVRLLGYSIFYY INPSLSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18963; Mature: 18831
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYVDVDSKICRPNEVKEIKEGDIILVYPATLNVNGKIVTFPPLSLISEECTNEIKNLSW CCCCCCCCCCCCCCCHHHHCCCCEEEEEECEECCCCEEEEECCHHHHHHHHHHHHHCCHH VEGIIVNQEIFHNVTFLKCENYIEGEIEILEPTLLTAFTFKHMIGGKIKGYTSQLIKGIP HHEEEECHHHHHCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHCCCC LLKVNNQPIISIDKGKVSVGLCFLDKRDILVRLLGYSIFYYINPSLSI EEEECCCCEEEEECCCEEEEEEEECCHHHHHHHHHHEEEEEECCCCCC >Mature Secondary Structure PYVDVDSKICRPNEVKEIKEGDIILVYPATLNVNGKIVTFPPLSLISEECTNEIKNLSW CCCCCCCCCCCCCCHHHHCCCCEEEEEECEECCCCEEEEECCHHHHHHHHHHHHHCCHH VEGIIVNQEIFHNVTFLKCENYIEGEIEILEPTLLTAFTFKHMIGGKIKGYTSQLIKGIP HHEEEECHHHHHCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHCCCC LLKVNNQPIISIDKGKVSVGLCFLDKRDILVRLLGYSIFYYINPSLSI EEEECCCCEEEEECCCEEEEEEEECCHHHHHHHHHHEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA