Click here to switch to the map view.

The map label for this gene is yccU [H]

Identifier: 227827396

GI number: 227827396

Start: 1061063

End: 1061527

Strand: Direct

Name: yccU [H]

Synonym: M1425_1115

Alternate gene names: 227827396

Gene position: 1061063-1061527 (Clockwise)

Preceding gene: 227827390

Following gene: 227827397

Centisome position: 40.67

GC content: 34.62

Gene sequence:

>465_bases
ATGGAGAACGAAGAGGAAGTCATAAGGGAAGTTTTACTTAAATATAAAAATGTAGCAACTGTTGGATTCTCTAAAGATCC
ATCTAAAGCGGCTTTTCAAGTGCCCAAGTTTTTAATGGATCATGGATATAACGTAATACCAGTAAATCCATCTGCGAGTG
AAATATTAGGTAAAAAGTCTTATCCATCGATTCTCGACGTACCGGATAAGGTCGAAATCGTTGAGATATTTAGACCATCA
AATGAGGTACCTAAAATTGTTGATCAAGTTTTAGAGAGAGTTAATAAGGTTGGTGACGTAAAGGTAATATGGATGCAGGA
AGGTATTAGAAATGATGAGGCTGCGGAAAAGGCTAGAAAAGCAGGACTTATAGTTATTCAAGATAGGTGTATGTATAGGG
AATACATGAAAAAAATATATAATGTAAATAATCCTCCCCCAGTATCATCCTTAAAAAATAGTTAA

Upstream 100 bases:

>100_bases
ATGCTTTAGTTAACTTAATATAAAAATATTTCTCCTAAATCTTCAAAAAACATTAAATTGACATAGACAAACTTAAAAGC
CAAAAATACAAGTAAATATT

Downstream 100 bases:

>100_bases
AGTTTTAATACTAGAAAAGATAAAATAAGTTTATGAGTTTAAAACTTTCAGAAAGCAAAGAGGCAATAAGATGTTGTTAT
AAAATATCAGATACTGATGT

Product: CoA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MENEEEVIREVLLKYKNVATVGFSKDPSKAAFQVPKFLMDHGYNVIPVNPSASEILGKKSYPSILDVPDKVEIVEIFRPS
NEVPKIVDQVLERVNKVGDVKVIWMQEGIRNDEAAEKARKAGLIVIQDRCMYREYMKKIYNVNNPPPVSSLKNS

Sequences:

>Translated_154_residues
MENEEEVIREVLLKYKNVATVGFSKDPSKAAFQVPKFLMDHGYNVIPVNPSASEILGKKSYPSILDVPDKVEIVEIFRPS
NEVPKIVDQVLERVNKVGDVKVIWMQEGIRNDEAAEKARKAGLIVIQDRCMYREYMKKIYNVNNPPPVSSLKNS
>Mature_154_residues
MENEEEVIREVLLKYKNVATVGFSKDPSKAAFQVPKFLMDHGYNVIPVNPSASEILGKKSYPSILDVPDKVEIVEIFRPS
NEVPKIVDQVLERVNKVGDVKVIWMQEGIRNDEAAEKARKAGLIVIQDRCMYREYMKKIYNVNNPPPVSSLKNS

Specific function: Unknown

COG id: COG1832

COG function: function code R; Predicted CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081810, Length=129, Percent_Identity=38.7596899224806, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 17505; Mature: 17505

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENEEEVIREVLLKYKNVATVGFSKDPSKAAFQVPKFLMDHGYNVIPVNPSASEILGKKS
CCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCC
YPSILDVPDKVEIVEIFRPSNEVPKIVDQVLERVNKVGDVKVIWMQEGIRNDEAAEKARK
CCCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHH
AGLIVIQDRCMYREYMKKIYNVNNPPPVSSLKNS
CCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MENEEEVIREVLLKYKNVATVGFSKDPSKAAFQVPKFLMDHGYNVIPVNPSASEILGKKS
CCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCC
YPSILDVPDKVEIVEIFRPSNEVPKIVDQVLERVNKVGDVKVIWMQEGIRNDEAAEKARK
CCCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHH
AGLIVIQDRCMYREYMKKIYNVNNPPPVSSLKNS
CCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 9868784 [H]