| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
Click here to switch to the map view.
The map label for this gene is 227827349
Identifier: 227827349
GI number: 227827349
Start: 1014163
End: 1016022
Strand: Direct
Name: 227827349
Synonym: M1425_1068
Alternate gene names: NA
Gene position: 1014163-1016022 (Clockwise)
Preceding gene: 227827348
Following gene: 227827351
Centisome position: 38.87
GC content: 35.59
Gene sequence:
>1860_bases GTGAGAAAGGAATTTTTTACCATTTTTATTATGTTTTTATTCCTTACAAGTCCACTTTTAATAATCTCTGCTAAGCCTTC ATCTCAATACAGCTCACCATCGTATTTGCTATTAAACAATTGGGTAAATCAGTCAATTTGGGTTGTAACTGGTATACCAA TACCAAACCCTCAACTTAACGGATTCCCTCTTTATAATACATCAATAAGAAACCTTTACGTAGGAAAATACGGTATAGTT AACCTTACTGTGAACTTTGATGTCCCAACGACTTCCGCTTATTTAAACCTTAACAATACTATTAATCTGATAAGCACTAA TGGAAATATTTCTATACTTACACCCCCAAATACACCATATATCCTTATCTTGTTCAACACTAACTCATCAACTTCAATTT ACGTTAAAACTAATACTACAATATTGCATGTGAATAGTTCTTTAGTAAGAATATACACTATTCCAGTAATTTACATTTCA ACTAACGCTAGTTACATTATTCAGAACAATACAGAAAAGATAATCGTTTATAAGGGAAAGTGGTTTGTGGAGCTAAGTGT TGGTGCTCAGCCTAATTTTAACATATCGGGGTTGGCTAAATTAAACGAAATGGAGATAGGAAAGTGGCTTAATTCATCTA AGTTACCAACAAGATTACCAACCAATTTATTGAAAGAGTACTATCTTTCACTACTACTAATTAAAGATGACCAAAACCCA TATTTAGGGACGTTTGCTGCTTCGCCTTCTCCAATTTATCTTTATTCTTGGGTAAGGGATTCTGCTTTTAGTGCAATGGC ATTACAATTAGCTGGGCACTATAACTCCGCTTTGAAGTTTTGGCTATGGTTGAGTAATGCTGGCCAATTACAGTCGGGGG TCTGGTATACTAGATATAATTTCTATGATGGTCAACCTGACACCACGTTTGGAATACCGGAACTTGATGGAATAGGATTA TATGAAATGGGCGTCTATCAATATTATAACCTTACCGGTAATGTAACTTTTCTCAAGCAAATCTTACCTACGATATATAA ATCTGTGAAATATCAAATTGAAATGATTAACGAGTCGAGATATCATTTACTGCCCCAAGACTTAAGCGTGTGGGAAGACA GAGAGGCCTATCACTTTTGGACTGAAGCTATTAATGATCTTGGATTAAAGAGTGTAGCCGAGATATATAGGGCATTGAAC TTTAGTAATTATACCACAATTCTATACTACGAGAAGGAATTGAATCAAAGCATCATAGGGAATTTCTGGAATGATAACTA TTTCGCCTCAGCTTTAGGAGTTTCAGTTGTATTTGAAGGAGGGAAAAGCGAGACAATACTGTCTCCGGAACCTCCATCAG TAGATTCCGCCACTTTGTTACCTATTAATTTAGGCTATCTTCCACCTACATCCAACTATTCCGTTTCAAACTTCGAGATT GTAAACAAAACGCTTCTTACAACTGGTGGACTAGCTAGATTTCCTAATGATATGTATCATTACTCTCAATCGCTCTACGA TGCCACTTCGCCAGAACCCCCATGGATAATAACCACACTATTTGAGGCTTTATACTTAGAAGAGTTAAGTAAATACAATG AAGCTCTTAATTTAATGAATTGGGTGTACGATCACTCGCAACATGGCCTTTTACCAGAAGCTATAGATCCTAAATATGCA TATCCCTTACCTACAACTTCACCGTTAACATGGTCATCAGCAATGTTCGACATAGTAGCCTTAAACTATAAACCCGTGAC CAATAGTCAGAGTACAACACTAACTGGATATTATGTGTTAGGAATCATGATAGCAATAGTAGCCATAATATCTATAATTA TAATACTAAGAAGAAGATGA
Upstream 100 bases:
>100_bases GAGAAAAAGTAAGAATATCCATTGATACTAATAAGGTAGTACTCTTTGATGCTTCAAGCGAAAGAAACCTACTTGAGCAA TACGAGAAAGTGAAGAAGAA
Downstream 100 bases:
>100_bases AGGAGAACATTTCTTCTTGATTATATTCGATAATCTATGAATATAATGTTGCTCACAGTAGTAGAAGACCTTATCTGAGG AATCTCTTTTAGCATAATAT
Product: glycoside hydrolase 15-related
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MRKEFFTIFIMFLFLTSPLLIISAKPSSQYSSPSYLLLNNWVNQSIWVVTGIPIPNPQLNGFPLYNTSIRNLYVGKYGIV NLTVNFDVPTTSAYLNLNNTINLISTNGNISILTPPNTPYILILFNTNSSTSIYVKTNTTILHVNSSLVRIYTIPVIYIS TNASYIIQNNTEKIIVYKGKWFVELSVGAQPNFNISGLAKLNEMEIGKWLNSSKLPTRLPTNLLKEYYLSLLLIKDDQNP YLGTFAASPSPIYLYSWVRDSAFSAMALQLAGHYNSALKFWLWLSNAGQLQSGVWYTRYNFYDGQPDTTFGIPELDGIGL YEMGVYQYYNLTGNVTFLKQILPTIYKSVKYQIEMINESRYHLLPQDLSVWEDREAYHFWTEAINDLGLKSVAEIYRALN FSNYTTILYYEKELNQSIIGNFWNDNYFASALGVSVVFEGGKSETILSPEPPSVDSATLLPINLGYLPPTSNYSVSNFEI VNKTLLTTGGLARFPNDMYHYSQSLYDATSPEPPWIITTLFEALYLEELSKYNEALNLMNWVYDHSQHGLLPEAIDPKYA YPLPTTSPLTWSSAMFDIVALNYKPVTNSQSTTLTGYYVLGIMIAIVAIISIIIILRRR
Sequences:
>Translated_619_residues MRKEFFTIFIMFLFLTSPLLIISAKPSSQYSSPSYLLLNNWVNQSIWVVTGIPIPNPQLNGFPLYNTSIRNLYVGKYGIV NLTVNFDVPTTSAYLNLNNTINLISTNGNISILTPPNTPYILILFNTNSSTSIYVKTNTTILHVNSSLVRIYTIPVIYIS TNASYIIQNNTEKIIVYKGKWFVELSVGAQPNFNISGLAKLNEMEIGKWLNSSKLPTRLPTNLLKEYYLSLLLIKDDQNP YLGTFAASPSPIYLYSWVRDSAFSAMALQLAGHYNSALKFWLWLSNAGQLQSGVWYTRYNFYDGQPDTTFGIPELDGIGL YEMGVYQYYNLTGNVTFLKQILPTIYKSVKYQIEMINESRYHLLPQDLSVWEDREAYHFWTEAINDLGLKSVAEIYRALN FSNYTTILYYEKELNQSIIGNFWNDNYFASALGVSVVFEGGKSETILSPEPPSVDSATLLPINLGYLPPTSNYSVSNFEI VNKTLLTTGGLARFPNDMYHYSQSLYDATSPEPPWIITTLFEALYLEELSKYNEALNLMNWVYDHSQHGLLPEAIDPKYA YPLPTTSPLTWSSAMFDIVALNYKPVTNSQSTTLTGYYVLGIMIAIVAIISIIIILRRR >Mature_619_residues MRKEFFTIFIMFLFLTSPLLIISAKPSSQYSSPSYLLLNNWVNQSIWVVTGIPIPNPQLNGFPLYNTSIRNLYVGKYGIV NLTVNFDVPTTSAYLNLNNTINLISTNGNISILTPPNTPYILILFNTNSSTSIYVKTNTTILHVNSSLVRIYTIPVIYIS TNASYIIQNNTEKIIVYKGKWFVELSVGAQPNFNISGLAKLNEMEIGKWLNSSKLPTRLPTNLLKEYYLSLLLIKDDQNP YLGTFAASPSPIYLYSWVRDSAFSAMALQLAGHYNSALKFWLWLSNAGQLQSGVWYTRYNFYDGQPDTTFGIPELDGIGL YEMGVYQYYNLTGNVTFLKQILPTIYKSVKYQIEMINESRYHLLPQDLSVWEDREAYHFWTEAINDLGLKSVAEIYRALN FSNYTTILYYEKELNQSIIGNFWNDNYFASALGVSVVFEGGKSETILSPEPPSVDSATLLPINLGYLPPTSNYSVSNFEI VNKTLLTTGGLARFPNDMYHYSQSLYDATSPEPPWIITTLFEALYLEELSKYNEALNLMNWVYDHSQHGLLPEAIDPKYA YPLPTTSPLTWSSAMFDIVALNYKPVTNSQSTTLTGYYVLGIMIAIVAIISIIIILRRR
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 15 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR006465 - InterPro: IPR000165 - InterPro: IPR011613 [H]
Pfam domain/function: PF00723 Glyco_hydro_15 [H]
EC number: NA
Molecular weight: Translated: 70224; Mature: 70224
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKEFFTIFIMFLFLTSPLLIISAKPSSQYSSPSYLLLNNWVNQSIWVVTGIPIPNPQLN CCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCC GFPLYNTSIRNLYVGKYGIVNLTVNFDVPTTSAYLNLNNTINLISTNGNISILTPPNTPY CEEEECCCCCEEEECCEEEEEEEEEECCCCCEEEEEECCEEEEEEECCCEEEECCCCCCE ILILFNTNSSTSIYVKTNTTILHVNSSLVRIYTIPVIYISTNASYIIQNNTEKIIVYKGK EEEEEECCCCEEEEEEECEEEEEECCCEEEEEEEEEEEEECCCEEEEECCCCEEEEECCE WFVELSVGAQPNFNISGLAKLNEMEIGKWLNSSKLPTRLPTNLLKEYYLSLLLIKDDQNP EEEEEEECCCCCCCCHHEEEECHHHHHHHCCCCCCCCCCCHHHHHHHHEEEEEEECCCCC YLGTFAASPSPIYLYSWVRDSAFSAMALQLAGHYNSALKFWLWLSNAGQLQSGVWYTRYN EEEEEECCCCCEEEEEEHHCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEEE FYDGQPDTTFGIPELDGIGLYEMGVYQYYNLTGNVTFLKQILPTIYKSVKYQIEMINESR EECCCCCCEECCCCCCCCCEEEECEEEEEECCCCHHHHHHHHHHHHHHHEEEEEEECCCC YHLLPQDLSVWEDREAYHFWTEAINDLGLKSVAEIYRALNFSNYTTILYYEKELNQSIIG EEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEHHHCCHHHHC NFWNDNYFASALGVSVVFEGGKSETILSPEPPSVDSATLLPINLGYLPPTSNYSVSNFEI CCCCCCEEHHEEEEEEEEECCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEE VNKTLLTTGGLARFPNDMYHYSQSLYDATSPEPPWIITTLFEALYLEELSKYNEALNLMN EEEEEECCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WVYDHSQHGLLPEAIDPKYAYPLPTTSPLTWSSAMFDIVALNYKPVTNSQSTTLTGYYVL HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEEEEECCCCCCCEEHHHHHH GIMIAIVAIISIIIILRRR HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKEFFTIFIMFLFLTSPLLIISAKPSSQYSSPSYLLLNNWVNQSIWVVTGIPIPNPQLN CCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCC GFPLYNTSIRNLYVGKYGIVNLTVNFDVPTTSAYLNLNNTINLISTNGNISILTPPNTPY CEEEECCCCCEEEECCEEEEEEEEEECCCCCEEEEEECCEEEEEEECCCEEEECCCCCCE ILILFNTNSSTSIYVKTNTTILHVNSSLVRIYTIPVIYISTNASYIIQNNTEKIIVYKGK EEEEEECCCCEEEEEEECEEEEEECCCEEEEEEEEEEEEECCCEEEEECCCCEEEEECCE WFVELSVGAQPNFNISGLAKLNEMEIGKWLNSSKLPTRLPTNLLKEYYLSLLLIKDDQNP EEEEEEECCCCCCCCHHEEEECHHHHHHHCCCCCCCCCCCHHHHHHHHEEEEEEECCCCC YLGTFAASPSPIYLYSWVRDSAFSAMALQLAGHYNSALKFWLWLSNAGQLQSGVWYTRYN EEEEEECCCCCEEEEEEHHCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEEE FYDGQPDTTFGIPELDGIGLYEMGVYQYYNLTGNVTFLKQILPTIYKSVKYQIEMINESR EECCCCCCEECCCCCCCCCEEEECEEEEEECCCCHHHHHHHHHHHHHHHEEEEEEECCCC YHLLPQDLSVWEDREAYHFWTEAINDLGLKSVAEIYRALNFSNYTTILYYEKELNQSIIG EEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEHHHCCHHHHC NFWNDNYFASALGVSVVFEGGKSETILSPEPPSVDSATLLPINLGYLPPTSNYSVSNFEI CCCCCCEEHHEEEEEEEEECCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEE VNKTLLTTGGLARFPNDMYHYSQSLYDATSPEPPWIITTLFEALYLEELSKYNEALNLMN EEEEEECCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WVYDHSQHGLLPEAIDPKYAYPLPTTSPLTWSSAMFDIVALNYKPVTNSQSTTLTGYYVL HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEEEEECCCCCCCEEHHHHHH GIMIAIVAIISIIIILRRR HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]