| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227826670
Identifier: 227826670
GI number: 227826670
Start: 227865
End: 229703
Strand: Direct
Name: 227826670
Synonym: M1425_0261
Alternate gene names: NA
Gene position: 227865-229703 (Clockwise)
Preceding gene: 227826660
Following gene: 227826671
Centisome position: 8.73
GC content: 35.62
Gene sequence:
>1839_bases ATGACTAGATATTTGATCTTGGGAAACGGTTCATTGACAGTTCTATATGATAGTAATTTTACAATAAGGGAAATATACTG GCCATTAACTACTACAAATAATTTACATAGGGGCAGGTTTGGTATTTTTGCTAATGGTAAGTTCTCATGGTTAGATAATT TAAATCCAAAGATTGGATATTTAGATGATACTTTAGCGGCATATTCATCTTTTTCCTTTGAGGGAGTGAATTTTTATTTA GAAGATGTAATAGATATGGCTTATGATATTTGGATAAGGAAAGTTTCAGTAAAAGACGTAAAGGATAGGGACGTTAGAGT TTTTACCGCTTTTGATTTTCATGTTGGGGGAACACCAGATGGTAATACTGCACTTTTTGACCCTTATTCTGAGTCTATGA TACAATATAAAGGTTCTAGATGGTTTTTACTTTCATCTTCGATTCCCTTCTATCAGTACGCTACGGGAATTAAGGAATAT AAGGGACTTTTAGGGACATGGAAAGATTGCGAAGATGGTGAACTTTCCGGTAATCCAATTGCTCAAGGTTCAGTTGATTT TGCTAGTAGTTTCAAATTGTATGGAGAAGATTTCTATATATGGTTAGTAGCCGGTAAAAATTATAGTGAAGCTAAGGGTT TAAGCGATTACGTGAGGAAGAGAACACCCGCGATTTTATTCAAGAGGGTTAAGGACTATTGGAGAGCGTGGTTAAGTAAA GTAAACGATTACGGTGAATACGATTCGATTTTAAGGAGAAGTTTACTGATTTTGCAATCCCATGTACAGAACAACGGTGC CATAGTAGCGTCACTAGATACTGATATTATGAAGTTTAATAGGGACACATATAACTACGTGTGGCATAGAGATGCTGTAT TCTGTATTTTAGCTCTTGAACTAATGGGGTATTTTGATAGATCTAGACAGTTCTTTGAATTCACTAGGAGGCTCTTCACA ATAAACGGTGCGCTATTTCATAAATATACTGTTGATGGACATTTCGGTTCCACATGGCATCCCTGGACTTTAGACTATTT GCCTATTCAAGAAGATGAGACTGCATTAGTACTTTACGCCTTATGGTTTCATTTTTCAAAGTGGAAAGATGTTGATTTTA TAAAGACTTACTATAGGCCCATGGTTAAGGGTATAGCTGATTTTCTAGTAAATTATAGAGAAAAGGCTACCGGTCTTCCA CTTCCCTCATTCGATCTATGGGAAGAGAGGATTGGTACTCACTTTTATACTACAATAACTGTAATTGCAGGATTAAGGGC TGCAGCGGATTTTGCAAGATATTTTGGAGAAGATGAGCTAGCACAAAAATATGAAACTGTTGCAGATCAAATGCGTAATT CATTAGATTTATTCTGGGTTGGTGACCATTACGCTAGAACGATATATATGAAGGAAGGTCAAGTTCATAAGATCGATGAA ACTGTTGACTCAAGTATATTGTTGGCACCAATATTTAATGTAATTCCGATGAGCGACTCTCGTTTTATAAAGAATTTAGA GACTGTTATAGAGAAATTAAGTGTTAAAAGGGGATTAGTTAGGTATGAGGGTGATCAATATTTAAGAGGAGGTAATAATT CCAATATTTGGTTTATATCTACATTATGGTTATCTCAAGTTTATTCGTTAATGGGTGAGAAAGATAAGGCTAAGGAAAAG ATAGATTGGGTCTTGTCGAAATCTTTACCAACTGGGGTTATACCAGAACAAATTGACGATAATGACAAATATCCATCAGT TTCTCCCTTAGCGTGGAGCCACGCAGAGTTAATAAGGGCAATATATGCGTTAAGAAATGGCACATTAGATCCTAAATAA
Upstream 100 bases:
>100_bases AATATAAATAGGCAGAGCACATTTCTTTTCAGCTCTCGAGTTATTAGATTTATATTAAAAAGAGTTAGAATAAAAGGAAG CTTTTAACATTATATATTAT
Downstream 100 bases:
>100_bases ATCGTAATTTTAACTATTATCTTTTATCATTATAAATTAAGTTTACAAGTTACCAAAAGATTTTTAAGAGTTTTATGAAA TCCTCTAACTATGCAAGGTA
Product: glycoside hydrolase 15-related
Products: D-glucuronate; alcohol
Alternate protein names: NA
Number of amino acids: Translated: 612; Mature: 611
Protein sequence:
>612_residues MTRYLILGNGSLTVLYDSNFTIREIYWPLTTTNNLHRGRFGIFANGKFSWLDNLNPKIGYLDDTLAAYSSFSFEGVNFYL EDVIDMAYDIWIRKVSVKDVKDRDVRVFTAFDFHVGGTPDGNTALFDPYSESMIQYKGSRWFLLSSSIPFYQYATGIKEY KGLLGTWKDCEDGELSGNPIAQGSVDFASSFKLYGEDFYIWLVAGKNYSEAKGLSDYVRKRTPAILFKRVKDYWRAWLSK VNDYGEYDSILRRSLLILQSHVQNNGAIVASLDTDIMKFNRDTYNYVWHRDAVFCILALELMGYFDRSRQFFEFTRRLFT INGALFHKYTVDGHFGSTWHPWTLDYLPIQEDETALVLYALWFHFSKWKDVDFIKTYYRPMVKGIADFLVNYREKATGLP LPSFDLWEERIGTHFYTTITVIAGLRAAADFARYFGEDELAQKYETVADQMRNSLDLFWVGDHYARTIYMKEGQVHKIDE TVDSSILLAPIFNVIPMSDSRFIKNLETVIEKLSVKRGLVRYEGDQYLRGGNNSNIWFISTLWLSQVYSLMGEKDKAKEK IDWVLSKSLPTGVIPEQIDDNDKYPSVSPLAWSHAELIRAIYALRNGTLDPK
Sequences:
>Translated_612_residues MTRYLILGNGSLTVLYDSNFTIREIYWPLTTTNNLHRGRFGIFANGKFSWLDNLNPKIGYLDDTLAAYSSFSFEGVNFYL EDVIDMAYDIWIRKVSVKDVKDRDVRVFTAFDFHVGGTPDGNTALFDPYSESMIQYKGSRWFLLSSSIPFYQYATGIKEY KGLLGTWKDCEDGELSGNPIAQGSVDFASSFKLYGEDFYIWLVAGKNYSEAKGLSDYVRKRTPAILFKRVKDYWRAWLSK VNDYGEYDSILRRSLLILQSHVQNNGAIVASLDTDIMKFNRDTYNYVWHRDAVFCILALELMGYFDRSRQFFEFTRRLFT INGALFHKYTVDGHFGSTWHPWTLDYLPIQEDETALVLYALWFHFSKWKDVDFIKTYYRPMVKGIADFLVNYREKATGLP LPSFDLWEERIGTHFYTTITVIAGLRAAADFARYFGEDELAQKYETVADQMRNSLDLFWVGDHYARTIYMKEGQVHKIDE TVDSSILLAPIFNVIPMSDSRFIKNLETVIEKLSVKRGLVRYEGDQYLRGGNNSNIWFISTLWLSQVYSLMGEKDKAKEK IDWVLSKSLPTGVIPEQIDDNDKYPSVSPLAWSHAELIRAIYALRNGTLDPK >Mature_611_residues TRYLILGNGSLTVLYDSNFTIREIYWPLTTTNNLHRGRFGIFANGKFSWLDNLNPKIGYLDDTLAAYSSFSFEGVNFYLE DVIDMAYDIWIRKVSVKDVKDRDVRVFTAFDFHVGGTPDGNTALFDPYSESMIQYKGSRWFLLSSSIPFYQYATGIKEYK GLLGTWKDCEDGELSGNPIAQGSVDFASSFKLYGEDFYIWLVAGKNYSEAKGLSDYVRKRTPAILFKRVKDYWRAWLSKV NDYGEYDSILRRSLLILQSHVQNNGAIVASLDTDIMKFNRDTYNYVWHRDAVFCILALELMGYFDRSRQFFEFTRRLFTI NGALFHKYTVDGHFGSTWHPWTLDYLPIQEDETALVLYALWFHFSKWKDVDFIKTYYRPMVKGIADFLVNYREKATGLPL PSFDLWEERIGTHFYTTITVIAGLRAAADFARYFGEDELAQKYETVADQMRNSLDLFWVGDHYARTIYMKEGQVHKIDET VDSSILLAPIFNVIPMSDSRFIKNLETVIEKLSVKRGLVRYEGDQYLRGGNNSNIWFISTLWLSQVYSLMGEKDKAKEKI DWVLSKSLPTGVIPEQIDDNDKYPSVSPLAWSHAELIRAIYALRNGTLDPK
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 15 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR006465 - InterPro: IPR000165 - InterPro: IPR011613 [H]
Pfam domain/function: PF00723 Glyco_hydro_15 [H]
EC number: 3.2.1.3
Molecular weight: Translated: 70936; Mature: 70805
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYLILGNGSLTVLYDSNFTIREIYWPLTTTNNLHRGRFGIFANGKFSWLDNLNPKIGY CCEEEEEECCCEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEECCEEEHHCCCCCCCCC LDDTLAAYSSFSFEGVNFYLEDVIDMAYDIWIRKVSVKDVKDRDVRVFTAFDFHVGGTPD CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEEEEEECCCCCC GNTALFDPYSESMIQYKGSRWFLLSSSIPFYQYATGIKEYKGLLGTWKDCEDGELSGNPI CCCEEECCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC AQGSVDFASSFKLYGEDFYIWLVAGKNYSEAKGLSDYVRKRTPAILFKRVKDYWRAWLSK CCCCCCHHHHHEEECCEEEEEEEECCCCHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHH VNDYGEYDSILRRSLLILQSHVQNNGAIVASLDTDIMKFNRDTYNYVWHRDAVFCILALE HHCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCHHEEEECHHHHHHHHHH LMGYFDRSRQFFEFTRRLFTINGALFHKYTVDGHFGSTWHPWTLDYLPIQEDETALVLYA HHHHHHHHHHHHHHHHHHHEECCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHH LWFHFSKWKDVDFIKTYYRPMVKGIADFLVNYREKATGLPLPSFDLWEERIGTHFYTTIT HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHH VIAGLRAAADFARYFGEDELAQKYETVADQMRNSLDLFWVGDHYARTIYMKEGQVHKIDE HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCEEEHHH TVDSSILLAPIFNVIPMSDSRFIKNLETVIEKLSVKRGLVRYEGDQYLRGGNNSNIWFIS HHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCEEEEH TLWLSQVYSLMGEKDKAKEKIDWVLSKSLPTGVIPEQIDDNDKYPSVSPLAWSHAELIRA HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH IYALRNGTLDPK HHHHHCCCCCCC >Mature Secondary Structure TRYLILGNGSLTVLYDSNFTIREIYWPLTTTNNLHRGRFGIFANGKFSWLDNLNPKIGY CEEEEEECCCEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEECCEEEHHCCCCCCCCC LDDTLAAYSSFSFEGVNFYLEDVIDMAYDIWIRKVSVKDVKDRDVRVFTAFDFHVGGTPD CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEEEEEECCCCCC GNTALFDPYSESMIQYKGSRWFLLSSSIPFYQYATGIKEYKGLLGTWKDCEDGELSGNPI CCCEEECCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC AQGSVDFASSFKLYGEDFYIWLVAGKNYSEAKGLSDYVRKRTPAILFKRVKDYWRAWLSK CCCCCCHHHHHEEECCEEEEEEEECCCCHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHH VNDYGEYDSILRRSLLILQSHVQNNGAIVASLDTDIMKFNRDTYNYVWHRDAVFCILALE HHCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCHHEEEECHHHHHHHHHH LMGYFDRSRQFFEFTRRLFTINGALFHKYTVDGHFGSTWHPWTLDYLPIQEDETALVLYA HHHHHHHHHHHHHHHHHHHEECCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHH LWFHFSKWKDVDFIKTYYRPMVKGIADFLVNYREKATGLPLPSFDLWEERIGTHFYTTIT HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHH VIAGLRAAADFARYFGEDELAQKYETVADQMRNSLDLFWVGDHYARTIYMKEGQVHKIDE HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCEEEHHH TVDSSILLAPIFNVIPMSDSRFIKNLETVIEKLSVKRGLVRYEGDQYLRGGNNSNIWFIS HHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCEEEEH TLWLSQVYSLMGEKDKAKEKIDWVLSKSLPTGVIPEQIDDNDKYPSVSPLAWSHAELIRA HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH IYALRNGTLDPK HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O; beta-D-glucuronoside
Specific reaction: H2O + a beta-D-glucuronoside = D-glucuronate + an alcohol
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]