| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227826622
Identifier: 227826622
GI number: 227826622
Start: 185685
End: 186860
Strand: Direct
Name: 227826622
Synonym: M1425_0213
Alternate gene names: NA
Gene position: 185685-186860 (Clockwise)
Preceding gene: 227826619
Following gene: 227826623
Centisome position: 7.12
GC content: 34.52
Gene sequence:
>1176_bases GTGGCCGTAGCCAATACTGTTATGGGTAACATTGACATAAACTTAAAAATAAATACTTATAACCTTATTGCAAATATGGA TCTGATATTACCAGACTATTATGGAGAGAATATTTACACATTATCTTGTTTTATAGCTGAATACCTTGGAGTTCAGAGGC AATGTTTGAATAAGATGAATTTAAACGTTAATAGTAAATTGGTTTTAGCATTATTTGATGGTCTAGGTTGGAACATATTT AATCGAACTGGGATAAATTTACAAGCAACAAAGATAACAAGTGTTTTCCCATCCACAACATCTACTGTATTGACAACATT ATTCACCGCATCAATGCCTGGTGAGCATGGTGTTTTAGGTTATAATACCTTCTCAAAGAGGTTAGGAGGAATCGTAAATA CTCTACGTTATACTTATCCTACGGTAAGTGATAGAGATTCCATAAGAGATTCCGTACCTTTTTCTTCATCGTTTCCTTAT GTTAAAGGCTATTTGAAAGAAGTTCAAGGTAAGAAGACTATATCTATAGTGCCTAAGGGAATTGAAAATACCGAGTTTAG CAATGCTACGCATGGAGCTTCTGGTGAGTCGAAAACTTATGTTAACTTTTGGGATGCATTTTATCAACTCTCACAGATTT TACAACAAGACGCATACGACTTTATCTACTTTTACGTTCCAGATGTGGATACTTTGTCTCATAAATATGGGCCGTATACA GATCCTACCATTAAATCTGCAAGAGATATTCTGATCAGCATCTTAGAGATTTCAGAAAAACATAAGAAATATAGTTTTAT AATAACAGCAGATCATGGCCACGTTCCCGTTTCTGAAACTATACTCTTCAACAATGACCAAGACTTACTTAATATGCTTG ATGTTCCTCCATATGGAGATTCTAGGGCAATATTTTTAAGAACTAGATATGACGTTTCAATTTATCTCAGCATAAAGTAT GGAAGCCTTAAAATATTCGGAAAAAGCGATCTTGAAAGGTTACTAGGAAAGATTAAGGACATTTCTGCCTTTCCGGACTA TATTGCAGTTCCTACTGATTACCGAGCATTCATATTTAATTTTAAGGAAAAAGACGACTATGATAAACTTAAAGGGCATC ATGGAGGACTATTGCAAGAGGAATTTGAGATACCTTTGGTGATCTTGAATGGTTGA
Upstream 100 bases:
>100_bases CCATACTAGAAATCCTATTCCAACTCCTAAAGCCCCAAATCCTATGGAGATATATGTAAATGTTTCAATCGTTTGAACAA TTGGTGGTGTTATAGTTTTT
Downstream 100 bases:
>100_bases ATATCATATTCCATCATGGGATGAAATAGAAGACGCAGTTTTTTCAATAGGCGAGGCGTTAGTTAAGAATAATTATATTC CAGATGTTTTGGTCGCGGTA
Product: type I phosphodiesterase/nucleotide pyrophosphatase
Products: NA
Alternate protein names: Phosphodiesterase I/Nucleotide Pyrophosphatase; Nucleotide Pyrophosphatase/Phosphodiesterase I; Type I Phosphodiesterase/Nucleotidepyro Phosphatase
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MAVANTVMGNIDINLKINTYNLIANMDLILPDYYGENIYTLSCFIAEYLGVQRQCLNKMNLNVNSKLVLALFDGLGWNIF NRTGINLQATKITSVFPSTTSTVLTTLFTASMPGEHGVLGYNTFSKRLGGIVNTLRYTYPTVSDRDSIRDSVPFSSSFPY VKGYLKEVQGKKTISIVPKGIENTEFSNATHGASGESKTYVNFWDAFYQLSQILQQDAYDFIYFYVPDVDTLSHKYGPYT DPTIKSARDILISILEISEKHKKYSFIITADHGHVPVSETILFNNDQDLLNMLDVPPYGDSRAIFLRTRYDVSIYLSIKY GSLKIFGKSDLERLLGKIKDISAFPDYIAVPTDYRAFIFNFKEKDDYDKLKGHHGGLLQEEFEIPLVILNG
Sequences:
>Translated_391_residues MAVANTVMGNIDINLKINTYNLIANMDLILPDYYGENIYTLSCFIAEYLGVQRQCLNKMNLNVNSKLVLALFDGLGWNIF NRTGINLQATKITSVFPSTTSTVLTTLFTASMPGEHGVLGYNTFSKRLGGIVNTLRYTYPTVSDRDSIRDSVPFSSSFPY VKGYLKEVQGKKTISIVPKGIENTEFSNATHGASGESKTYVNFWDAFYQLSQILQQDAYDFIYFYVPDVDTLSHKYGPYT DPTIKSARDILISILEISEKHKKYSFIITADHGHVPVSETILFNNDQDLLNMLDVPPYGDSRAIFLRTRYDVSIYLSIKY GSLKIFGKSDLERLLGKIKDISAFPDYIAVPTDYRAFIFNFKEKDDYDKLKGHHGGLLQEEFEIPLVILNG >Mature_390_residues AVANTVMGNIDINLKINTYNLIANMDLILPDYYGENIYTLSCFIAEYLGVQRQCLNKMNLNVNSKLVLALFDGLGWNIFN RTGINLQATKITSVFPSTTSTVLTTLFTASMPGEHGVLGYNTFSKRLGGIVNTLRYTYPTVSDRDSIRDSVPFSSSFPYV KGYLKEVQGKKTISIVPKGIENTEFSNATHGASGESKTYVNFWDAFYQLSQILQQDAYDFIYFYVPDVDTLSHKYGPYTD PTIKSARDILISILEISEKHKKYSFIITADHGHVPVSETILFNNDQDLLNMLDVPPYGDSRAIFLRTRYDVSIYLSIKYG SLKIFGKSDLERLLGKIKDISAFPDYIAVPTDYRAFIFNFKEKDDYDKLKGHHGGLLQEEFEIPLVILNG
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44183; Mature: 44052
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVANTVMGNIDINLKINTYNLIANMDLILPDYYGENIYTLSCFIAEYLGVQRQCLNKMN CCCCCEEEEEEEEEEEEEEEEEEEECEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCC LNVNSKLVLALFDGLGWNIFNRTGINLQATKITSVFPSTTSTVLTTLFTASMPGEHGVLG CCCCCEEEEEEECCCCCCEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEE YNTFSKRLGGIVNTLRYTYPTVSDRDSIRDSVPFSSSFPYVKGYLKEVQGKKTISIVPKG CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEEECC IENTEFSNATHGASGESKTYVNFWDAFYQLSQILQQDAYDFIYFYVPDVDTLSHKYGPYT CCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHCCCCCCC DPTIKSARDILISILEISEKHKKYSFIITADHGHVPVSETILFNNDQDLLNMLDVPPYGD CHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEECCCHHHHHHHCCCCCCC SRAIFLRTRYDVSIYLSIKYGSLKIFGKSDLERLLGKIKDISAFPDYIAVPTDYRAFIFN CCEEEEEEEEEEEEEEEEEECCEEEECHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEE FKEKDDYDKLKGHHGGLLQEEFEIPLVILNG CCCCCCHHHHCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure AVANTVMGNIDINLKINTYNLIANMDLILPDYYGENIYTLSCFIAEYLGVQRQCLNKMN CCCCEEEEEEEEEEEEEEEEEEEECEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCC LNVNSKLVLALFDGLGWNIFNRTGINLQATKITSVFPSTTSTVLTTLFTASMPGEHGVLG CCCCCEEEEEEECCCCCCEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEE YNTFSKRLGGIVNTLRYTYPTVSDRDSIRDSVPFSSSFPYVKGYLKEVQGKKTISIVPKG CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEEECC IENTEFSNATHGASGESKTYVNFWDAFYQLSQILQQDAYDFIYFYVPDVDTLSHKYGPYT CCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHCCCCCCC DPTIKSARDILISILEISEKHKKYSFIITADHGHVPVSETILFNNDQDLLNMLDVPPYGD CHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEECCCHHHHHHHCCCCCCC SRAIFLRTRYDVSIYLSIKYGSLKIFGKSDLERLLGKIKDISAFPDYIAVPTDYRAFIFN CCEEEEEEEEEEEEEEEEEECCEEEECHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEE FKEKDDYDKLKGHHGGLLQEEFEIPLVILNG CCCCCCHHHHCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA